Juglans regia (English walnut): 108990461
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Entry
108990461 CDS
T05245
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108990461
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108990461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
108990461
NCBI-ProteinID:
XP_018819978
UniProt:
A0A2I4EKR2
A0A834D768
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All DBs
Position
1:26245..32911
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AA seq
473 aa
AA seq
DB search
MSTSGQPQFRYTQTPSKVLHLRNLPWECIEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
VGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDAETASAARNALNERSIPRYLL
PEHVNSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGVVQPALGPDGKRKEA
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALVQYPDVSIAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLTSQVSGLPGAPAAWQ
NPRPGPMYAGNDFNTGGSVPAQYPSRPMAPWDASMQAGRAPFGSVPSTYPGQTFAVATSQ
IHSAVSSMGFSSGFPPNVRPGGASSSGQLQPGIPPNVRPSGGPPPGHPTYYGQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatcggggcagccccagttccgatacacccaaaccccctcgaaggtcctccac
ctccgcaatctcccctgggagtgcatcgaggaggagctcatcgagctctgcaagccattc
ggcaagatcgtcaacaccaagtgcaacgttggcgccaatcgcaaccaggctttcgtcgaa
tttgcagatttaaatcaggccatatcaatggtttcatactatgcatcatcttctgagcct
gcccaagttcgtggcaaaactgtgtatattcaatattcaaatagacatgaaatcgtgaac
aacaaaagtccaggagatgttcctggaaatgtcttgctggttaccattgagggtgtagaa
gttggtgatgttagcattgatgtaattcacttggtattttctgcttttggctttgtacat
aaaattgctacttttgaaaaggctgctggtttccaggcattaatccagtttagtgatgct
gagaccgcatctgctgctaggaatgccttaaatgaaagaagcatacccaggtatttgctt
ccagagcatgttaattcatgtcacctgcgtatttcatattctgcacacactgatctgaat
atcaagttccagtctcacagaagcagggactatacaaatccatatcttcctgtgaatcct
actgcaattgagggtgttgtgcagcctgcactagggcctgatggaaagaggaaagaagct
gagagtaatgtgcttcttgcttcaattgagaatatgcagtatgctgtcactgtggacgtt
ctgcacacggtattctctgcctttggcactgtccagaaaattgctatatttgagaagaat
ggtcaaacccaggcacttgttcaataccctgatgttagtattgcagcagttgcccgagaa
gctttagaggggcattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttacagtgacaaaagtagagattacacgatccca
gatgcaagtttgcttacatcacaagtgtcaggtctccctggtgctccagcagcttggcaa
aatcctcggcctggtccaatgtatgctggaaatgattttaatactggcggttctgttcct
gctcagtatcctagcagaccgatggcaccatgggatgcctccatgcaggccggcagagcc
ccatttggatctgttcctagcacttatcctggtcaaacttttgcagtagcgaccagccaa
attcattctgccgtctcttcaatgggattttcttcagggtttccaccaaatgtgcgacct
ggtggtgcttcatcttctggtcagcttcagccggggattccaccaaatgtgcgacctagc
ggtggtccgcctcctggtcaccctacttattatggccaatag
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