Juglans regia (English walnut): 108990732
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Entry
108990732 CDS
T05245
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jre03000
]
108990732
03036 Chromosome and associated proteins [BR:
jre03036
]
108990732
Transcription factors [BR:
jre03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108990732
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108990732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
ADD_ATRX
CTD2
Motif
Other DBs
NCBI-GeneID:
108990732
NCBI-ProteinID:
XP_035548929
UniProt:
A0A6P9EMZ4
LinkDB
All DBs
Position
8:20299367..20369364
Genome browser
AA seq
1490 aa
AA seq
DB search
MEEKLEEVEDAKSISSDSFIDDSEGDEPSTSGQEEGLHFEESLTEEEIEELIAEFLEVES
KAAEAQEALEKESLAKVESEVKEELAQTLHGDELETAVANEMTTLIEEWEAVLDELETEG
AHLLEQLDGAGIELPSLYKWIESQAPNGCCTEAWKKRVHWVGSQVTGEFNESIADSEKFL
QIHRPVRRRHGKLLEEGASGFLQKKLANDGSKDGVTENPEVDWSSLNKIFSDGVSDHDTS
FGSKHWASVYLASTPQQAAVMGLNFSGVDEVEEIDDIDGNSNDPFVAAAIANEKELHLSE
EQKTNFRKVKEEEDANIDRKLQIHLKRRRHRKRCKQDINAKDVFPASWVGNSNPISNEKT
CEDGNGVPNNHNDFACQNVLTDVVDRSEASNDVDDKVPICNVASLTSESVFLDYTEPRGS
KRPNENQELKVDFKKSRTVIIESEDETNSLKDNSPCNMANVDPQIESKENICDSGVNSLP
LQSPNEKFDCTACSKIVAEVHQHPLLKVIVCRDCKCLMEEKMQAKDPDCTECYCGWCGGT
SDLVRCKSCKTLFCTSCVKRNIGMDCLSEIQTSGWKCCSCRPSLLHRLSLQLEKAMGSGD
FIVSSSDSGSDDSDAGVNIAFSTKRRQKKKIRRILDDAELGEETRRKIAIEKERQERLKS
LQEQFSAKSKMMSSAGCNGNLSEGASVEVLGDASTGYIVNVVREKGEEAVRIPPSISAKL
KAHQVSGIRFMWENIIESIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTALRSADLGL
RTALIVTPVNVLHNWRQEFMKWRPSELKPLRVFMLEDVSRERRVELFAKWRAKGGVFLIG
YTAFRNLSLGKNMKDRHMAREICYALQDGPDILVCDEAHIIKNTRADTTQALKQVKCQRR
IALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLDDVKIMNQR
SHILYEQLKGFLQRMDMNVVKEDLPPKTVFVIAVKLSPIQVKLYKRFLDVHGFTKDKVST
EKIIKRSFFAGYQALAQIWNHPGILQLTKEDRDYVRREAAVDNFLVDGSSSDENIDYNMV
LEEKTKSANDYLHGKNGGGFLQQDWWNGILHENNFKELDYSGKMVLLLEILTMSSDMEDK
VLVFSQSIPTLDLIELYLSRLPRSGKSGKLWKKGKDWYRLDGRTESSERQKLVERFNEPT
NRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLM
AHGTMEEKIYKRQVTKEGLAARVLDRQQVGRTISKEEMLHLFEFGDDENLDTLTDLGQEN
GHTRNNNMIGQFGKSLKQAMPLSHGSCSSDNIMESLLGKHYPRWISNCHEHETLLQENEE
EKLSKEEQDMAWEVYQRTLEWEEVQRVPLDESAREQRPAVSSMPPPAAETATVLQSEKRN
PHLVQRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDSRLAR
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctagaggaagtagaagatgctaagagcatttctagcgattcttttatt
gacgactcagaaggtgatgaaccatcaacatctggacaagaagaaggattacattttgag
gaatctttgaccgaggaagaaatagaagagctaattgctgagttcttagaagttgagagt
aaggctgcagaggctcaagaagcacttgaaaaggagtctcttgccaaagtggagagtgaa
gttaaagaggagttggcacaaactctccatggggacgagttggaaacggctgttgcaaat
gaaatgacaactctcatagaggagtgggaggccgtgcttgacgagcttgagactgagggt
gctcatttgttggagcaacttgatggagctggtattgagctaccaagtttatataaatgg
attgaaagtcaggctcctaatggttgctgtactgaagcttggaaaaagagggttcactgg
gtaggatctcaggtaaccggtgaatttaatgagtcaatagctgatagtgagaagtttctt
caaatccacaggcctgtaagaagacgacatggtaaattattggaggagggtgcaagtgga
tttctgcagaaaaaactagctaatgatggaagcaaggatggtgtgacagaaaatccagag
gttgattggagctctctcaacaaaatattttctgatggtgtatctgatcatgatacttca
tttggcagcaagcattgggcctccgtttacttggcaagtactccccagcaagcggcagtg
atgggacttaacttttctggagtcgatgaggtggaggagattgatgacattgatggcaat
tctaatgatccttttgttgcagccgcaattgcaaatgaaaaagaactacatctttctgaa
gaacaaaagacgaattttagaaaggttaaagaagaagaagatgcaaatattgatcgtaaa
ctgcaaattcatctgaaacggagaagacataggaagagatgtaaacaggacatcaatgcg
aaagatgtttttccagcatcctgggttggcaattctaatcccatatcaaatgagaaaact
tgtgaagatgggaatggtgtgcctaataatcataatgactttgcatgccagaatgtgctg
actgatgtggttgatcgttctgaagcttctaatgatgttgatgacaaagtaccaatatgt
aatgtggcttccttaacttctgagtctgttttccttgattataccgaacccagaggttcc
aagcgtccaaatgagaatcaggagctaaaagttgatttcaagaagagtcggactgttatc
atagaaagtgaagatgaaactaattctttgaaggataattcaccttgcaatatggctaat
gtggaccctcaaattgagtctaaggagaatatttgtgactctggtgtcaattcccttcct
ttgcagagtccaaatgagaagtttgactgtactgcttgcagtaaaatagttgctgaagtg
caccaacatccgcttctgaaagtaattgtttgccgggattgcaaatgcttaatggaagaa
aagatgcaggcgaaggaccctgattgcaccgagtgttattgtggatggtgtggaggtaca
agtgacttggtaagatgcaaatcatgcaagacattgttctgtaccagttgtgtaaagagg
aatattggtatggattgcttgtctgagattcagacatcaggctggaaatgttgttcctgc
cgtccaagtctactccacagattatcattgcagttagagaaagccatgggatctggagat
tttatagtttctagctctgatagtggttctgatgattctgatgcaggtgtgaacattgca
ttcagcacaaagagaaggcaaaaaaagaaaattaggaggatccttgatgatgctgaatta
ggagaagagacaagaagaaaaatcgcaattgaaaaggaacgccaagaaagattgaaatct
ttgcaagaacagttttctgccaaatctaagatgatgagctccgcaggctgtaatgggaat
ttatctgaaggcgcgagtgttgaagttcttggtgatgcttcaacaggttacatagtgaat
gttgtgagggagaaaggggaagaggctgtgaggattcctccaagcatctcggctaaattg
aaggcccatcaggtttctgggataaggttcatgtgggaaaatatcatagagtccatcaga
aaagtgaagtctggggataaaggtcttggttgcattctagcccacaccatgggccttggt
aaaacctttcaggtcatagctttcttgtacactgctttgagaagtgctgaccttggatta
agaactgcactcattgttactcctgttaatgtgctacataattggcggcaagagttcatg
aagtggaggccttcagagttaaaacctctacgtgtcttcatgcttgaagatgtatcaagg
gaaagaagagtggaattatttgcaaagtggagagcaaaaggtggtgtcttcttgattggc
tatacagcctttcggaacttatcccttggaaagaatatgaaggatcggcacatggctaga
gaaatttgttatgccttgcaggatggaccggatattcttgtttgtgatgaagcccatatt
attaagaatactagggctgatacaacccaagccttgaaacaagtgaaatgccagagaaga
attgcattaactggatcacctcttcagaacaatctcatggaatattattgtatggttgat
tttgtaagagagggttttcttggaagcagccatgagtttaggaaccgcttccaaaatcct
atagagaatggtcagcatactaattctactcttgatgatgtgaaaattatgaaccaaagg
tctcatatcctctatgaacagttgaaaggatttctccagagaatggacatgaatgtggtg
aaggaggacctaccacctaaaactgtctttgtaatagctgtaaagctttctcctatacaa
gtgaaactatataagagattccttgatgtgcatggattcactaaggacaaggtctctact
gaaaaaatcataaagagaagtttttttgccgggtaccaagccttagctcagatatggaac
catcctggtatcttgcaattgacaaaagaagacagagactatgtaaggcgtgaagctgct
gttgacaatttccttgtggatggcagttctagtgatgaaaatatagattataatatggtt
cttgaagagaagacgaagagtgcaaatgattatcttcatggcaagaatggcggtggcttt
ttgcaacaggattggtggaatggtattcttcatgaaaataattttaaagagcttgattat
agtggcaagatggttttgttgcttgaaatcctaaccatgtcttctgatatggaggataag
gtattggtctttagccagagcattccaaccttagatctgatagaactttatctttcaaga
ttaccccgaagtggcaaaagtgggaagctttggaagaaaggaaaagactggtataggcta
gatggaagaactgagagctctgagaggcaaaagctggtggagaggttcaatgagccaaca
aataggagggtgaagtgcactttgatttcaacaagagctggatctttggggattaatctt
catgccgctaaccgcgttgttatagttgatggctcttggaatccgacatatgatcttcag
gctatatatcgggcttggaggtatggccaaaaaaagccagtgtttgcttaccgactgatg
gcccatggaactatggaagaaaaaatttataaacgccaggtcacaaaggagggcctggct
gcgagggtattagatagacagcaggtaggtaggactatttctaaagaagagatgttgcat
ctctttgagtttggtgatgatgagaacctggacactttaactgatctgggccaagagaat
ggtcatacaaggaacaacaatatgatcggccaatttggaaaatctcttaagcaggcaatg
cctctttctcatggaagctgctcttcagacaatataatggaaagtttacttggaaaacat
tatccaagatggatttccaattgccatgaacatgagactcttttgcaagagaatgaagaa
gaaaaactatcaaaagaagagcaagacatggcttgggaagtgtatcagagaacattagag
tgggaagaagtgcagcgagttcctctggatgaatctgcacgtgagcaaaggccagctgtg
tcaagcatgccccctcctgcagcagagactgcaactgtcttacaatctgagaagaggaat
ccccatttggtacagcggaaatgcaccaacctttcgcacctgctgactcttagaagccag
ggcacaaaggttggttgcagtacagtatgtggggaatgtgcccaggagatcagctgggag
gacctcaatcgggacagcagactggcaaggtga
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