Juglans regia (English walnut): 108990803
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Entry
108990803 CDS
T05245
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
jre
Juglans regia (English walnut)
Pathway
jre03015
mRNA surveillance pathway
jre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108990803
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108990803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108990803
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108990803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
108990803
NCBI-ProteinID:
XP_018820439
UniProt:
A0A2I4EM15
A0A833U1M4
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Position
13:complement(24903910..24910109)
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AA seq
652 aa
AA seq
DB search
MDPMAEEQTDYDDEEYGGAHKTQYQGGGAIPALADEELMGEDDDYDDLYNDVNVGEGFLQ
LHRSEATVPPATVGNGALQTQKNEPQSRVEARGAQELSIPGVSVEGKYSSSVAHYPEQEG
PSAVKGPEVGSVSYPDGSSASHGARVVEMPRDAQLKNMGFQGSTPVPPNSGVDPSDMPGK
ITKDPMPVVNSGPGGPRGVPQMPTNQINVNVNVNHPIVSENQIRPHAENGQTTLFVGELH
WWTTDAELESALSQYGRVKEIKFFDERASGKSKGYCQVEFYEAAAAASCKEGMNGHVFNG
RACVVAFASPQTLKQMGASYVNKNQPQTQSQPQGRRPMNDGVGRGGNMNYQSGEGGRNYG
RGGWGRGGQGVLNRGPGRGRGGGMGARNMVGNNAGVGSGATGGGYGQNFGGPAFGGPAGG
MMTPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMIPSFPAVNTMGLAGVAPHVNPAFFGR
GMATNGMGMMGAAGMEGHHAGMWNETNMGGWGGEEHGRRTRESSYGGDDGASEYGYGDAN
HEKGVRSSAASREKERGSERDWSGSSERRPRDDREQDWDRPEREHRDRRYREEKDNYRDH
RQRERDVGYEDDWDRGQSSSRPRSRSRAIPEEDHKSRSRDGDYGKRRRLPSE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatggctgaggagcaaacagattatgatgatgaggaatatggaggggctcac
aagacgcagtatcaaggaggtggagccatacctgcccttgcagatgaagaactgatggga
gaagatgatgattatgatgatctgtacaatgatgttaatgttggagagggtttccttcag
ttgcaccggtctgaggcaacagtcccacctgctactgttggcaatggagctcttcaaact
cagaaaaatgaacctcaatcaagagtggaagctaggggtgcccaagagctgagcattcct
ggggtttcagtcgagggaaagtattctagttctgttgctcattatcctgagcaggagggg
ccatctgctgttaagggaccagaagtgggatctgttagttaccctgatggatcttcggcc
tcacatggagcaagggttgtggagatgcctcgtgatgctcaattaaaaaacatggggttt
cagggatccacacctgtgccccccaattctggggttgatccttctgatatgcctggaaaa
attactaaagatccaatgcctgtggtaaattctggccctggtggtcctcgaggggttcca
cagatgcccactaatcaaatcaatgtgaatgtaaatgtcaatcatccgatagtgagtgaa
aatcagattcgtcctcatgcagagaatggtcaaaccacgctgtttgtgggagaactacat
tggtggacaactgatgcagagcttgagagtgctttatctcaatatggaagggtcaaggaa
attaagttttttgatgaaagagctagtggtaaatccaaagggtattgtcaggttgagttt
tatgaggcagctgctgcggcttcatgcaaagagggaatgaatggtcatgttttcaatggc
cgagcttgtgttgtggcctttgcttccccgcaaacattgaagcagatgggagcttcttat
gtaaacaagaatcaaccccagactcaatctcagcctcagggaaggaggccaatgaatgat
ggtgtggggagaggtggcaatatgaattatcaaagtggagaaggaggaagaaattatgga
cggggtggatggggacggggtgggcagggtgtactcaaccgaggtcctgggaggggaaga
ggagggggcatgggtgcaaggaacatggttgggaacaatgctggagttggaagtggtgcc
actggaggaggttatggacaaaactttggaggtcctgcttttgggggtcctgctggtggt
atgatgaccccacagggcatgatgggttctggatttgatccaacatatatgggccgggga
ggtggttatggagggtttccaggtcctgcttttcctggaatgattccttcatttccagct
gttaatactatgggacttgctggggtggcacctcatgtcaaccctgccttctttggtcgt
ggaatggcaactaatggaatgggaatgatgggtgctgctggaatggagggtcatcatgca
gggatgtggaatgagacgaacatgggtggatggggaggagaagaacatggtcgaaggacg
agggagtcaagctatggtggtgatgatggtgcttctgaatatggttatggagatgcaaat
catgaaaaaggggtaaggtcaagtgctgcctccagggaaaaagaacggggatctgagcgt
gactggtcaggaagctctgagaggaggcctcgtgatgacagggaacaggattgggacaga
ccggaaagggagcacagggaccgccgttacagggaagaaaaagacaattaccgagaccat
cggcagagagaacgtgatgtgggttatgaggatgactgggacagggggcagtcttcttct
agacctcgaagcaggtctcgagcaatcccagaagaagatcacaagtctcgatccagggat
ggggattatggaaagaggagacgcttgccatctgaatga
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