Juglans regia (English walnut): 108990813
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Entry
108990813 CDS
T05245
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108990813
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108990813
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
108990813
NCBI-ProteinID:
XP_018820449
UniProt:
A0A2I4EM26
A0A833WXR0
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All DBs
Position
13:24858019..24860060
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AA seq
401 aa
AA seq
DB search
MAIPLTVLVFLALLAPISISSSPVPDPELVVQEVNMNISASRRNLGYLSCGTGNPIDDCW
RCDPNWEQNRQRLADCAIGFGKHAIGGRDGKIYVVTDASDDPVNPKPGTLRHAVIQDEPL
WIIFKSDMVIKLKEELIMNAFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQG
GNAYVRDSPGHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCHDGLVDAIHGATAITISNN
YMTHHNKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYSHWEM
YAIGGSADPTINSQGNRFLAPNDIFNKEVTKHEDAPQSQWKNWNWRSEGDLLLNGAFFTP
SGAGASSSYSKASSLGARPSSLVSTITAGAGSLKCKKGSHC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccactcactgttttagtctttttggctcttctagctccaatctccatttcc
tcatcaccagttcctgacccagaactagtggtgcaagaagtaaatatgaacatcagtgcc
tccaggagaaacttgggctatctctcttgtgggactggaaatcccatcgatgattgctgg
aggtgcgacccgaattgggagcagaaccggcaacggctagccgactgtgcaattggcttt
ggaaagcatgctatcggcggcagagacgggaagatatatgtggtcaccgacgccagtgat
gatcctgtgaatcccaaaccaggcactcttagacacgctgtgatccaagacgagcccctt
tggatcatcttcaagagtgacatggtgatcaagctgaaggaagagttaatcatgaacgct
ttcaagacgattgatgggcgtggtgcgagcgtgcacattgccggggggccatgcattact
atccagtacgtgaccaacattattattcatggcctcaacatccatgactgcaagcaaggt
gggaatgcctatgtaagggactctcctggacattatggctggagaacagtctccgacggc
gacggtgtctcgatctttgggggaagccatgtttgggtggatcattgctctttatcaaat
tgccatgatggactagttgatgccattcatggagccacagcaatcaccatctctaacaat
tatatgacccaccataacaaggtcatgctcttgggccatagtgattcctacacacaagac
aaaaacatgcaagtcactatagcattcaaccattttggagaagggcttgtacagaggatg
ccaagatgtagacatgggtatttccatgtggtgaacaatgactattcccattgggaaatg
tatgcaattggtggcagtgctgatccaactattaacagccaagggaacagatttctcgcc
cccaatgacatatttaacaaggaggttaccaaacacgaggatgcaccacagagccagtgg
aagaactggaactggagatccgaaggagatttgctgttgaatggtgcttttttcactccc
tcgggtgccggagcatcttcaagttactccaaggcatcaagcttgggagcaagaccatct
tccctcgtgagcacaatcactgctggtgcaggttcacttaagtgcaagaagggctcgcat
tgctga
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