Juglans regia (English walnut): 108990908
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Entry
108990908 CDS
T05245
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
jre
Juglans regia (English walnut)
Pathway
jre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108990908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108990908
03009 Ribosome biogenesis [BR:
jre03009
]
108990908
04131 Membrane trafficking [BR:
jre04131
]
108990908
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jre04147
]
108990908
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108990908
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108990908
Membrane trafficking [BR:
jre04131
]
SNARE
SNARE associated proteins
Others
108990908
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108990908
Exosome [BR:
jre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108990908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
Parvo_NS1
AAA_18
IstB_IS21
ABC_tran
Viral_helicase1
Vps4_C
NACHT
AAA_7
AAA_lid_PRS2_C
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
108990908
NCBI-ProteinID:
XP_018820570
UniProt:
A0A2I4EMF1
LinkDB
All DBs
Position
3:26324349..26330096
Genome browser
AA seq
806 aa
AA seq
DB search
MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVTLHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDACDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRFQI
FKSCLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRGKEN
PEAMEEDIEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFAD
NPSTGAAASDPFATSAAGADDDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcaagcggaatcttctgactctaagggaacgaagagggacttcagcacggcg
atcttggagcgcaagaaggccccgaatcggcttgttgtggacgaggcaatcaacgacgac
aactcggtcgtcacgctccacccagataccatggaaaagctccagctgttccggggcgac
acgatcctgatcaaggggaagaaaaggaaagataccatctgcattgctcttgctgatgat
gcatgcgatgaaccaaagataaggatgaacaaggttgtgagaagcaacctgagggttagg
cttggtgatgtcgtttctgttcaccagtgtgcagatgtcaaatatggaaagcgcgtgcac
atacttcctgttgatgataccattgaaggggtcaccggcaatctatttgatgcgtatttg
aaaccttatttcctggaggcataccgcccagtgaggaagggtgatttattccttgtgaga
gggggaatgagaagtgtagagttcaaggttattgagactgacccgccagagtactgtgtg
gttgccccagacacagagatcttctgtgagggagaacctgtgagaagggaggatgagaat
agattggatgaagttggttatgatgatgttggtggtgttaggaaacagatggcacagatt
cgtgaattagtggagctgcccctaaggcatccacaactatttaaatcgataggtgtcaag
ccaccaaaaggaattctgttgtatggaccccctgggtctgggaagactctaattgcccgg
gctgttgccaatgaaactggtgccttctttttctgcatcaacggacctgagatcatgtca
aaattggccggggaaagtgagagcaacctcaggaaagcatttgaggaagcagagaagaat
gcaccatccatcattttcattgatgagattgactctattgctcctaagcgagagaagact
catggagaagttgagaggagaattgtttctcagctcttgacacttatggatgggttgaaa
tctcgagcacatgttattgtcattggggctacaaatcgtcccaatagcattgaccctgct
ttgagaaggtttggaagatttgacagggaaatagatattggtgtcccggatgaagttgga
cgtcttgaggttctccgtatccatacaaagaacatgaagcttgctgaagatgttgattta
gaaagaattgctaaggatacccatggttatgttggtgctgatctagcagctctatgtact
gaggccgcacttcaatgcattagagaaaagatggatgtgatagacttggaagatgagaca
atcgatgcggagatacttaattcaatggccgttacaaatgagcacttccaaacagctctt
ggtacaagcaatccatctgctctccgtgaaactgttgttgaagtgcccaatgtcagttgg
gaggatattggaggtctcgagaatgttaagagggaacttcaagagactgttcaataccca
gtggagcatcctgagaaatttgagaagtttggaatgtcaccatctaagggagttcttttc
tatggccctcctggatgtgggaaaacactgctggccaaagctattgctaatgaatgccag
gcaaactttatcagtgtcaagggtcctgagttgcttacgatgtggtttggagagagtgaa
gccaatgtacgggaaatatttgacaaggcccgccaatctgctccttgtgttctattcttt
gatgaacttgactcaattgctactcagagaggtagcagcgtaggagatgctgggggtgct
gctgatagggttttgaaccaactcttgacagaaatggatggcatgtctgcaaagaaaact
gtattcatcattggggccaccaacagacctgatattatagatcctgcactcctgcgacct
ggtcgtcttgatcagttgatctacatccctctccccgatgaggagtcccgcttccagata
tttaagtcttgcttgaggaaatctccagtttccaaagatgttgatctcagagctcttgcc
aagtatactcaaggctttagcggtgctgacattacagagatatgccagcgtgcatgcaaa
tatgccataagagagaacattgagaaagatattgagagggaaaggaggggaaaagagaat
cctgaggcaatggaggaggatattgaggatgaagtggcagagatcaaggcagcccatttt
gaggaatcaatgaagtatgctcgaaggagtgtgagtgatgctgacattcgtaaataccag
gcatttgctcaaacattgcagcaatcaagagggtttggaagtgagtttaggtttgccgat
aacccatctactggggctgctgcatctgaccctttcgcaacttctgctgctggtgcagac
gatgatgacctttacagttag
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