Juglans regia (English walnut): 108991287
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Entry
108991287 CDS
T05245
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108991287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108991287
03009 Ribosome biogenesis [BR:
jre03009
]
108991287
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108991287
Spliceosome [BR:
jre03041
]
Complex A
U1 snRNP components
U1 related factors
108991287
Complex B
108991287
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
Pre-60S particles
Helicases
108991287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108991287
NCBI-ProteinID:
XP_018821008
UniProt:
A0A2I4ENN9
LinkDB
All DBs
Position
7:44040172..44054103
Genome browser
AA seq
508 aa
AA seq
DB search
MSRYDSRSGDPTSYRDRDRDRRSDSGFGGSMGFSGSIRSSSSRNNYEGAESPRKLDLDGL
TPFEKNFYVESSSVTAMSEREVDEYRQQREITIEGRDVPRPVTSFHDVGFPDYVMQEITR
AGFLEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVL
VLAPTRELAVQIQNEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM
LESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLYWSATWPKEVEQLAR
QFLYNPYKVIIGSSDLKANHAIHQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKG
CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYV
INYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILKEAGQKVSPELAA
MGSGAPPPIGHGGFRDRVRGYGGGRSWS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctatgacagtcgctccggcgaccccacttcgtaccgcgaccgcgaccgcgac
cgcagaagcgattcggggttcggtgggtctatggggttcagtggctcaattcgttcctca
tcaagcaggaataattatgaaggtgccgagtcaccaaggaagttggatttggatggattg
actccttttgagaagaacttctatgttgagtcgtcatcggtgacagcaatgtcagaaagg
gaggttgatgagtatcgacaacaaagggaaattacaattgaaggccgtgatgttccaagg
cctgtcacgagttttcatgatgttgggttcccagattatgttatgcaagagattacgaga
gctggctttttagaacctactgccattcaagctcaaggatggccaatggctctgaaaggc
cgtgatctcattggtattgctgaaacagggtcagggaagacacttgcctacctgttgcct
gccattgtccatgttaatgcccagccaattctagctccgggagatggcccaattgtgtta
gtattagctccaacccgtgaacttgcagtccaaatacaaaatgaagctacaaaatttggt
gcatcatcaaagattaaaaacacttgcatatatggtggtgttccaaagggacctcaagta
cgtgatctccagaaaggtgttgaaattgttattgctacaccagggaggttgatagatatg
ttggaatcacatcatacaaacttgcgaagggttacttatcttgtgttggatgaggcagac
cggatgctagacatgggatttgagcctcaaatccgaaaacttgtttctcagattcgccca
gatcgtcaaactctatactggagtgctacctggcctaaggaggttgaacaacttgctaga
cagttcctttacaacccatacaaagtgataataggctcttcagatttgaaagctaaccat
gccatacaccagcatgtggacattgtttctgagaatcagaaatataacaaattggtaaag
ttgctggaggatataatggatggcagtcggatactgatcttcatggataccaaaaaagga
tgtgatcagatcactcgacagcttcgcatggatggttggcccgccctctcaattcatgga
gataaaagtcaagcagaaagggattgggtcctctcagagtttaaagctggcaagagtcct
ataatgactgcaacagatgttgcagctcgtggtttagatgtgaaggacgtgaaatatgtg
ataaactatgactttccgggttccctcgaggactatgttcaccgcattggtcgtacagga
agggctggggcaaaaggaactgcatacactttcttcacagctgcaaatgccagatttgcg
aaggaacttattagcatactgaaggaggctggtcagaaggtcagtcctgaattggcagca
atggggagtggtgcacctccacccataggtcatgggggttttcgagatcgtgtaaggggt
tatggtggtggtcgatcttggagctaa
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