Juglans regia (English walnut): 108991377
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Entry
108991377 CDS
T05245
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108991377
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
108991377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
TrAA12
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
108991377
NCBI-ProteinID:
XP_018821153
UniProt:
A0A2I4EP33
A0A833TML7
LinkDB
All DBs
Position
8:complement(20045840..20067793)
Genome browser
AA seq
628 aa
AA seq
DB search
MVFITSCARHKPTVHYDNGCVCCEVCGKVLHQDVFTEEPTFVKGAGGESRVAGSYVRSIQ
SGYSESFRRTIDKGRDEIDRMVTAFNISGGDSIINPACSFYQIAVERNFTRGRRTEQVAA
ACLYIACRVARDPKPFLLIDFSEFLGINVYVLGAVFLQLCQLLSLGEHPTIVKPVDPSLY
IPRFAEKLLKERNMKVCGTALHIIASMKRDWIQTGRKPSGLCGAALYISALSHGYRFSKS
DIVKIVHICEVTLTKRLMEFENTDSGSLTVEELIKNASEVKACELSEDRSLKSGEVLCEH
KNSGKPHFAHGLCRSCYEDFVELSGGLHGGSEPPAFQRAERERIAMESANKQGDESSVFL
KPWQGSENIEQLERSQKATKNEQLDLRENDSNSAAIEDQIEIDGVSDACQKSMDTSLVSD
DESDGLSDIDDVEVSGYLNNEEEMRFKKIIWEEMNKEYLQEQAAAAAAKMESQASFQNSS
GELRAAHELAAAAAAAVAKSRKERKRKQDMNANPAQTAAEAAHQMLIKKRLSSKINYDVL
ETLFAEKPSSDSNKKLKASNDDGDAKGQSNGEKEHDGDITDNYDEPGQGYGNLEQEDVNG
TYGNELHVDFENEEDVYGYNYDNGEEEY
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggtttttattactagctgtgctaggcacaagcctactgtacattacgacaatggctgt
gtatgttgtgaggtctgtggaaaagttctccatcaagatgtgttcactgaagaacctact
tttgtcaagggtgcaggaggagagagtcgagtggcaggttcctatgtaagatccattcaa
agtggttattcagaatcatttaggaggaccatagataaagggagagatgagatagatcgt
atggttacagcctttaatataagtggtggcgactctataattaatcccgcctgttcattt
tatcagatagcagttgaacggaattttactagggggcgtagaacagagcaagttgctgct
gcctgcctttatattgcatgtcgtgtagctagagatccaaagccatttcttcttattgat
ttttcagagtttctagggataaatgtttatgtgctaggcgctgtatttttgcagctttgc
caacttctaagccttggagagcatcctactattgtaaaacctgttgatccttcactttat
attcctcgatttgcagaaaaactattaaaggaaaggaacatgaaggtctgtggaactgca
ttacacattatagcaagcatgaaaagagattggattcagacaggcagaaaacctagtggg
ctgtgtggtgcagcattatatatatctgccctatcacatgggtacagattttcaaagtct
gacattgtaaaaattgtacatatttgtgaggtaacgctgacaaaacgattgatggaattt
gagaatacagattcagggagcttaacggttgaggagttgattaagaatgcttcagaggtt
aaggcatgcgagctatcagaggataggtccctcaagtctggggaagtgctgtgtgagcat
aaaaatagtgggaaacctcattttgcccatggactttgcagaagttgttacgaagatttt
gttgaactttctgggggactgcatggtgggtcagaacctcctgcatttcagcgggctgaa
agggagagaatagccatggaatctgctaataagcagggggacgaatcaagtgttttctta
aagccttggcaagggtcagaaaacattgaacagcttgaaagaagccaaaaggcaaccaag
aatgagcaattggatttgagagagaatgatagtaattctgctgccattgaagatcagatt
gaaatagatggtgtttctgatgcatgccagaaatccatggatacaagtttggtcagtgat
gatgaatcagatggcctttctgatattgatgatgttgaggtgagtggctacctcaacaat
gaggaggagatgcgttttaagaagattatctgggaggaaatgaacaaagagtatcttcag
gaacaagcagcagctgctgctgctaagatggaaagtcaggccagctttcagaactcttct
ggtgaattgcgagccgcacatgaactagctgcagcagctgcggcagctgttgcaaagtca
agaaaggagcggaaacgaaaacaagatatgaatgccaatcctgctcaaaccgctgcagaa
gcagctcatcaaatgctgatcaagaagagactcagttcaaaaatcaactacgatgtattg
gagacactctttgcagaaaagccatcttctgattcgaataaaaaactcaaagcatcaaat
gatgatggcgatgccaaagggcaaagtaatggtgagaaagagcatgacggggatatcaca
gacaattatgatgaaccgggacaagggtatggaaacttggaacaggaagatgtcaacgga
acatatggcaatgaattgcatgtggacttcgaaaatgaagaggatgtttatggttataac
tacgataatggtgaagaggaatattga
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