Juglans regia (English walnut): 108991587
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Entry
108991587 CDS
T05245
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108991587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jre03400
]
108991587
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108991587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
108991587
NCBI-ProteinID:
XP_018821451
UniProt:
A0A2I4EPY4
LinkDB
All DBs
Position
2:complement(23359147..23365279)
Genome browser
AA seq
1041 aa
AA seq
DB search
MAARTRSRFRLLNRNDNEDGGDDAASAVSKRNNDKDVDGNVLSDWLRRNVDEDGGSEVIL
ETSLESSSSEDDNDDDDYEAKQLQSCEDSKKISSNSSSQEDEEEEVAAESKNMNRGSEKR
GRPKRFDAGVKRRRYGLDFVVDSDKDIDVNNHEEGSVNALHYVAKRTRSHFISKCRKKKM
KLGTFSHPLCVDEEEVESSSAHDDSNEGGDDAYDDAYESEDDLSDDEAYHADKKTVSTRG
KYKSDKGNRGERVQSTKRMPTKCKGIRWEKSCNVMRILIDSILEKEEVRLEELASSGDEA
CKDESNPSFSETYLPLKFTFGTEEPNSPKKSEDDKKMDELWAELELALRASEIGSVDSAK
VENEDALPPEDDVDSASLCHLGNHQIILDEQVGFRCAFCSYVKMEIKYILPSFSTHPCGK
SDWRDSGGAMNHSIFDELGSQDSLCDSYHGSGSREHAEGTVWDIIPGIKSSMYSHQRDGF
EFIWKNIAGGIYRDKLENQTTFSGGNGCIISHAPGTGKTRLTVVFLQAYMSWNPGCRPLV
IAPCSMLLTWEEEFQKWKFDIPFHNLNKPELSGKESKFADYIVRQVGHLEKTDIRILKLY
SWRKDRSILGMSYKLFVKLTGLRKGELKPSTQHAQIRNILLELPGIVVLDEGHIPRNSDS
HILQALSNIKTEKRIILSGTPFQNNFDELYNTLCLARPKFANIRHQWGSLTSSITKATDD
RLKCEKLKKVRDMIEPFVHVHKGSILQEKLPGLRDSVVILKPAQLQKSLFDELSHYAKGN
HFKFEHYESLISVHPSILLKCGEKEFPSDRDKLEGLNPEAGVKTKFLMELIQLSEAMSEK
VLVFSQYLRPLTFMMNQLKSHFNWTEGNEVLYINGKNDAKERQSSINVFNDPSSNIRVLL
ASTRACSEGINLVGASRVVLLDVVWNPSVERQAISRAHRLGQEKVVYVYHLIVFGTKEEK
KYYRQVEKDLLSELVFSSSDMSDDQQKLSPPDLKDKILEEMVQHEKLKHMFEKIAYQQKE
SKLIETFTLLEKRSVVASSSS
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaggactcggtcgcggttcagattgttgaataggaatgataatgaggatggt
ggtgatgatgctgcatcggctgtttcgaagaggaataatgataaggatgttgatggcaat
gttctctctgattggctgagaaggaatgtggatgaagatggtggtagtgaagttattctg
gagacatcgttggaatcgtcctctagtgaagatgacaatgatgatgacgattatgaagcg
aaacaattgcaaagctgcgaggattctaagaagatcagttcgaatagcagtagtcaagag
gatgaggaagaggaagttgctgcggaaagcaagaatatgaacagaggaagtgaaaaaaga
ggaaggcctaaaagatttgacgctggggtcaagaggaggagatatggattggacttcgtg
gtggatagtgacaaagatatcgacgttaataatcacgaagagggttctgttaatgcgctt
cattatgtagcaaaacgaacccgttctcattttatttcaaaatgcagaaagaaaaaaatg
aagcttggaacttttagtcaccccttatgtgttgatgaggaggaagtggaatcttcatct
gcacatgatgacagtaatgaaggcggtgatgatgcttatgatgatgcttatgagagtgaa
gatgatcttagtgatgacgaggcttatcatgctgacaagaaaactgtgtctactagaggc
aaatataagagtgacaaaggtaatcgtggtgaacgtgtgcaatccaccaagaggatgccc
accaaatgtaagggcatccgctgggagaaaagttgtaatgtcatgaggattcttatagat
tccattttggagaaggaagaagttcgtctagaagagttggcttcttctggagatgaggct
tgcaaagatgaaagcaatccatcattttccgagacgtatctacccctgaagttcactttt
ggaactgaggagccaaattcaccaaagaaatcagaagatgataaaaagatggatgaactt
tgggctgagcttgagcttgcactcagagctagtgaaattggttcggtcgattctgctaag
gttgaaaatgaagatgcccttcctccagaggatgatgttgatagtgctagcctttgccac
ctagggaatcatcagattattcttgatgaacaagttggatttagatgtgcattttgctct
tacgtcaaaatggagatcaagtatattctaccatcttttagtacacatccttgtggaaaa
tcagactggagggactcagggggagcaatgaatcactccatctttgatgagcttggttct
caagattccctttgcgattcctaccatggcagtggatcccgagagcatgctgaaggcaca
gtgtgggacatcattccaggaataaaaagtagtatgtactcacatcaacgtgatggtttt
gaatttatttggaagaacatagccggaggaatttatcgtgacaagttggaaaaccaaaca
actttctctggtgggaatgggtgcattatttctcatgctcctgggacagggaaaacccgg
ttgaccgttgtttttctccaggcatacatgagctggaatccaggatgtagaccactcgtt
attgctccttgcagcatgctccttacatgggaagaggaatttcaaaagtggaaattcgac
atcccctttcacaatctgaacaagccagagctgtctggcaaggaaagtaagtttgctgac
tacattgtgaggcaagttggacacctggagaaaacagatatccgtatcttgaagttgtat
tcctggagaaaggatagaagcattctagggatgagttacaaactgtttgtaaaacttact
ggtttgagaaagggtgaattgaagccaagtacgcaacatgctcagatcagaaatatcctc
cttgagcttcctggtattgtagtcctcgatgaagggcacatacctcgaaactccgacagc
catatcctgcaggctttgtcaaatatcaaaacagaaaagagaatcatcctttcaggaact
ccttttcaaaataattttgatgagctatataatactctctgccttgcacggccaaagttt
gcaaacataagacatcaatggggttctcttacaagttccattaccaaagccactgatgac
aggctgaaatgtgagaaactgaagaaggttagagatatgattgagccatttgtgcatgta
cacaaaggttccatactacaagagaagcttcctggtttgagggactctgtggttatatta
aagccagcccaactgcagaagagcctctttgatgaactcagtcattatgctaaagggaac
cattttaaatttgagcattacgagtctttgatatctgtccatccttcaatcttgcttaag
tgtggggaaaaggagtttccttctgaccgggataagttagaaggattgaatccagaggct
ggagtaaaaacaaaatttttaatggaactcatccagcttagtgaggctatgagtgagaaa
gttttggttttcagtcaatatcttcgtccattgacctttatgatgaatcagctcaagtct
cattttaattggactgaagggaatgaggtgctgtatataaatggaaagaatgatgcaaag
gagcgccaatcctcaattaatgttttcaatgatcccagtagcaacattagggtattactg
gcgtcgacaagggcttgttctgaaggtataaatttggttggggcttcaagggttgtttta
ttggatgtggtatggaatccatcggtggaaagacaagctataagccgtgcacataggcta
gggcaggaaaaagttgtgtatgtttaccatctcattgtctttgggacaaaggaagagaag
aaatattatagacaagttgagaaggacttgttgtctgagttggtattctcttcttctgac
atgagtgatgaccagcagaaactctcacctccagacctgaaggataaaattttggaagaa
atggttcaacatgagaaacttaaacatatgtttgagaagatagcataccaacagaaagag
tccaaactaattgagacttttaccttgttggaaaagcgatctgttgtagcatcatctagt
tcttga
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