Juglans regia (English walnut): 108991882
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Entry
108991882 CDS
T05245
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108991882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jre03400
]
108991882
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108991882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108991882
NCBI-ProteinID:
XP_018821829
UniProt:
A0A2I4ER09
A0A833XL47
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Position
7:complement(51689574..51697655)
Genome browser
AA seq
1257 aa
AA seq
DB search
MVKRRHLYQSKNAFDTYPFEALFFGSWEAVEFIRIMNGTMTVHFVDNQYIIQEKSPFSNL
RIRSRQATLSDCTCFLRPGIDICVLSASRQPKNSDEEKRGPVWLDARISSVERKPHEDQC
SCQFYVNFYVNQGPLGSERGTLSKEVNIVGIDRISILQRLEGVPCEDQHYRWASSEDCSS
LPKTKLFLGKFLSELSWLLVVSVLKHIAFDVRSVQNKIVYKILGADDDSCTSDSDNYLNA
VNFRVKDDILVPNMVQFVPADAIEAGPACGMPEAGSPFYDLMELRRSKRRNVQPERFLGC
DSAPEIDVGFVRTRPYKVDQCRDDEMSLPLSSLFHMHANRSKEHNEGKPKIHAQRIKPFE
DLLEYKQTIKSTEVKSSMASQTEHQTELAIIPLPDESGPIAFEHHHHLAKSNGNYEEIND
HSDRYHYMNSTPKLQRKKISGLEDMEFEGRWEGKASNREVQRKRSHSVFSKRDRFCEERN
YQKRSLSAGAYKDLIDSFLKNMDTTVKKEEPQIIDQWKKSKDTNSLDQGREVEPPPDENE
EEVSETEMLWKEMELAMASSYLFEDNEDSNAGVSTETMNKSNDYCQHEYKLDEEIGILCC
RCGFVSSEIRDVSAPFMQYTCWNTDEKNCNEEDSVHKLDEDEDLHLLCRQVSSDVHLSEE
NENVWALIPELVKKLHLHQKKGFEFLWKNIAGSLEPSLMERASKKTGGCVISHSPGAGKT
FLIISFLVSYLKLFPGKRPLVLAPKTTLYTWYKECIKWEIPVPVYLIHGRRTYRVFKQHS
QKSVSFPGVPKPTDDVMHVLDCLEKIQKWHAHPSVLVMGYTSFLTLMREDSKFAHRKFMA
KVLRESPGILVLDEGHNPRSTKSRLRKVLMKVETDHRILLSGTLFQNNFCEYFNTLCLAR
PKFVNEVLKELDPKYRRKKKGKEKARHLRESRARKFFLDQIAKKIDSNIGEERMQGLNML
RNLTNGFIDVYEGGSSDSLPGLQIYTLLMNSTDIQHEILVKLHKIMAGYPGYPLELELLI
TLGSIHPWLIKSTGCASKFFSARELMELEKYKFDLKKGSKVRFVLNLVYRVVKKEKILIF
CHNIAPVKLFLELFENIFGWQRGREVLVLTGDLELFERGRVMDKFEEPGGASRVLLASIT
ACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLATGTLEEGKYRR
TTWKEWVSSMIFSEAFVEDPSRWQAEKIEDDILREMVEEDRMKSFHMIMKNEKASTS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagagaaggcatctatatcaatccaaaaatgcatttgatacttatccttttgaa
gcacttttctttggctcatgggaggcagtggagttcatcagaatcatgaatgggactatg
accgtgcattttgtggataatcagtacataattcaggagaaaagtcccttctcaaacctc
cgcataaggtcaaggcaagctactttatctgactgcacctgttttttgagacccggcatt
gatatatgtgtgctttcagcatctcgacagccaaagaattcagatgaagaaaaacggggc
cccgtgtggcttgatgctagaataagttctgttgagaggaagcctcatgaagatcaatgc
tcatgccagttttatgttaacttctatgttaaccaaggccctctaggttcagagagagga
acactcagtaaagaggttaacattgtgggaattgatcgaatttccatcctccaaaggctt
gaaggagttccttgtgaagatcagcactatcggtgggcttcctctgaggactgctcttct
ttgcccaaaactaaattgtttcttgggaaattcttatctgagctttcatggttgcttgtt
gtatcagttttgaagcatatagcatttgacgtaagatctgtgcaaaacaagattgtctat
aaaattttgggagctgatgatgatagctgtacatctgactctgataattacttaaatgct
gtaaatttcagagtaaaagatgatattttggtgcccaacatggtacaatttgttccagca
gatgccattgaggcaggcccagcttgtggaatgcctgaagctggatcgccattttatgat
cttatggaattgcgacgttccaagcgtcgaaatgtacaacctgagcgctttcttggctgt
gatagtgctccagagatagatgttggctttgtccgaaccaggccatacaaggtagaccag
tgtagagatgacgagatgtcattaccactgtcttctctgtttcatatgcatgcaaaccgt
tcaaaagagcataatgagggtaaaccaaagatccatgctcaaagaataaaaccctttgag
gatctcctagagtacaaacaaacaatcaaatcaacggaggtaaaatcaagcatggctagt
caaacagagcatcaaactgaacttgctattattcctctgccagacgaaagtggcccaata
gcctttgaacaccatcatcatcttgccaaaagtaatggaaattatgaagagatcaatgac
cattctgaccggtatcattacatgaatagtacccctaaattacagagaaagaaaatttct
ggcttggaggatatggagtttgaaggtagatgggaaggaaaagcttctaatcgagaagtg
caaagaaaaagatctcattctgtattttctaaaagggatagattttgtgaagagaggaat
tatcagaagagatccttgagtgcaggtgcatacaaggatctgatagattcgttcttaaag
aacatggataccaccgtcaagaaagaagagccacagatcattgaccagtggaaaaaaagt
aaggacacaaacagcttggaccaagggagggaggtggaaccaccccccgatgagaatgag
gaagaggtctcagaaactgaaatgttgtggaaagaaatggaactagccatggcatcaagt
tatctttttgaagacaatgaggattcaaatgctggagtgtcaactgagaccatgaacaaa
tcaaatgactattgccagcatgaatacaagttggatgaagaaattggaattctgtgttgt
agatgcggctttgtgagctcagagataagagatgtttcagcaccctttatgcaatacaca
tgctggaatacagatgaaaagaattgtaatgaagaagattcagtgcataagctggatgaa
gatgaggatttgcatctcctttgtcgtcaagtttcctcagatgtgcatttatcagaagaa
aatgaaaatgtatgggctttaatccctgaacttgtaaagaaattacacctccaccaaaag
aagggtttcgaatttctatggaaaaatattgctgggtctttggaaccatcacttatggaa
agggcatccaagaaaactggtggttgtgttatttctcattctcctggagcggggaaaacc
tttctcattatttcattccttgttagctatttgaaattgttccctggaaaacgacccttg
gttcttgctccaaagactacactatatacctggtacaaggaatgcatcaagtgggaaatt
cctgttccagtttatctaattcacggtcgtagaacctacagagtcttcaagcagcattca
cagaaatctgtgtcctttcctggagttccaaagccgactgatgatgtcatgcatgttttg
gattgcctagagaaaatacagaagtggcatgcacacccaagtgttctcgtcatgggttat
acatcatttctaacattaatgcgagaagactccaagttcgcccacagaaagtttatggct
aaagtgctacgggaaagtccagggatattggtactagatgaaggacacaaccccagaagt
acaaaatcaaggttgagaaaggttttgatgaaagttgaaacagaccatagaatattgctt
tcaggtaccttgtttcagaacaatttctgtgaatattttaacaccctgtgtttggcaagg
cccaagtttgtaaatgaagttttgaaggaattagacccaaagtacaggaggaaaaagaaa
gggaaggaaaaagctcgccatttgagagaatccagagcaagaaagttctttttagatcag
attgcaaaaaaaattgattcaaacataggagaagagaggatgcagggtttaaacatgttg
agaaatctcacgaacggatttatagatgtgtatgaaggtggaagttctgacagcctccca
ggtttacagatttacacgttattaatgaattcaactgacatacagcatgagattttggta
aaactgcacaagataatggcaggataccctggatatccactggaattagaacttttgata
acccttggctcaatacatccctggttaattaaaagcacaggctgtgctagcaagtttttt
agtgcgagggaacttatggagcttgaaaaatacaagtttgatttgaagaaaggatcaaaa
gtaagatttgttttgaaccttgtgtatcgtgttgtcaagaaggagaagattctgatcttt
tgccacaacattgcacctgttaaattgttcctggagttatttgagaatatctttgggtgg
cagagaggtagagaggttttggtccttacaggggatttagagttgtttgagcgaggaaga
gtgatggataaatttgaggaaccaggtggagcctcaagggtgctgcttgcttcgattaca
gcttgtgctgagggcattagtttgacagcagcttctcgggttataatgttggactcagaa
tggaacccttccaagacaaagcaggctattgcacgggcttttcggcctggtcagcaaaaa
gtggtttatgtgtatcagctattggcaacaggaacactggaagaaggcaagtatcgtagg
acaacatggaaggagtgggtctcaagcatgatttttagtgaggcatttgtggaggaccct
tctcgctggcaggctgaaaagattgaagatgatattttacgggaaatggtggaggaggat
cgtatgaaatcattccatatgatcatgaagaatgaaaaggcttcaacaagttga
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