Juglans regia (English walnut): 108992149
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Entry
108992149 CDS
T05245
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
jre
Juglans regia (English walnut)
Pathway
jre04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108992149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
108992149
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108992149
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
108992149
NCBI-ProteinID:
XP_018822157
UniProt:
A0A2I4ERY1
A0A833X2Z4
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All DBs
Position
11:23605291..23609181
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AA seq
584 aa
AA seq
DB search
MPRMGYSFPEEVLEHVFSFIQSDEDRNAISAVCRSWHDIERWSRRRVFVGNCYAISPKMV
IRRFPEVRSIELKGKPHFADFNLVPEDWGGYVAPWISAMASAYPWLEEIRLKRMVITDES
LELISKSFKNFKVLVLSSCEGFSTEGLAAIAANCRNLRELDLGESEVEDLSGHWLSHFPD
NYTSLVSLNIACLGCEVSFSALERLVGRCPNLRTLRLNRAVPLDKLANLLCRAPQLVELG
TGAYSSELRPDLFSNLSGAFSGCKELKSLSGFWDVVPGYLPAVYPICSKLTSLNLSYATI
QSPELIKLVSQCQNLQRLWVLDYIEDAGLVALAASCKDLRELRVFPSDPFGPEPNVGLTE
QGLVSVSEGCPKLQSVLYFCRQMSNAALITIARNRPNMTRFRLCIIEPQAPDYLTLQPLD
VGFGAIVEHCKDLRRLSLSGLLTDRVFQYIGTHAKKLEMLSVAFAGESDLGLHHILSGCE
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPGLNVEVIDER
SPPDSRPESCPIEKLYIYRTVSGPRFDMPGFVWTMAENPALRLS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaatggggtactcgttcccggaggaggtgctggagcacgtgttctcgttcata
cagagcgacgaggaccggaacgcgatctcggcggtgtgcaggtcgtggcacgatattgag
cggtggagcaggaggcgggttttcgtcggcaactgctacgccatcagccccaagatggtg
atccgacggttccccgaggttcggtccattgagctcaaggggaagccgcacttcgctgac
ttcaacctcgtccccgaagactggggaggctacgtggccccctggatctctgccatggcc
tcggcctacccgtggctcgaagagattcggttgaaacgtatggttatcacggacgagagc
ttggagctcatttccaagtccttcaagaacttcaaggtcctcgtgctgtcgtcctgcgag
ggcttcagcaccgagggcctcgccgccattgctgccaattgcaggaatttgagagaactg
gacttgggggagagtgaagtggaagacctgagtgggcactggctgagtcatttccctgat
aactacacctcactggtgtcccttaacattgcctgcttagggtgtgaggtgagtttctct
gccttggagcgcctggtgggtaggtgccccaacctgaggactctgcggctcaaccgtgca
gtgcccctcgacaagcttgcaaacctactttgtcgggcgcctcagcttgttgagttaggc
acgggggcatactcatctgagttgcgacctgatctattctcaaacctatcaggagctttc
tctggatgcaaggaacttaagagcctgtctggtttttgggacgtagttccaggctatctt
ccagctgtttatcctatctgctctaagttaacatcattgaacttgagctatgctaccatc
cagagccctgagcttatcaagctagttagccaatgtcagaacttgcagcgcttatgggtt
cttgattacattgaagatgctggccttgttgctcttgcagcatcttgcaaggatctacgg
gaattgagggtatttccatctgatccgtttggaccagaaccaaatgtgggattgacggaa
cagggccttgtttctgtttctgaaggctgtcctaagctccagtcggttctctacttctgc
cggcaaatgtctaatgctgccttaataactattgccaggaatcgaccaaacatgaccagg
tttcgtctttgtatcattgagccccaagcccccgattaccttacccttcaaccacttgat
gtgggatttggagccattgtggagcactgcaaggatctacgacgtctttccctctctggt
cttctcaccgatcgtgtgtttcagtacattgggacacatgccaaaaaactagagatgctc
tccgtggcttttgctggagaaagtgatctgggactccatcacatactgtctggttgtgaa
aatcttaggaagctggagattagggactgtccctttggtgacaaggctcttttggccaat
gctgcgaagctggagacaatgcgatccctttggatgtcttcttgctctgttagtttcgga
gcatgtaagctgcttggtcagaagatgccagggcttaatgttgaggttattgatgagagg
tcccccccagattcaagaccggaaagctgccccattgagaagctttacatatataggaca
gtttctgggccaaggtttgacatgcctggatttgtttggacaatggctgaaaatcctgca
ttgaggctttcttga
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