Juglans regia (English walnut): 108992747
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Entry
108992747 CDS
T05245
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00450
Selenocompound metabolism
jre00970
Aminoacyl-tRNA biosynthesis
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
108992747
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108992747
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
jre01007
]
108992747
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
108992747
Enzymes [BR:
jre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
108992747
Amino acid related enzymes [BR:
jre01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108992747
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108992747
Prokaryotic type
Other AARSs
108992747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
CoV_peptidase
Anticodon_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
108992747
NCBI-ProteinID:
XP_018822921
UniProt:
A0A833TTW1
A0A2I4EU47
LinkDB
All DBs
Position
12:17507998..17524694
Genome browser
AA seq
810 aa
AA seq
DB search
MGDVSGHAAGDRKVPKLPIEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLR
SYNAIYMCGTDEYGTATETKAMEENSTPKEICDKYYAIHKEVYEWFNISFDKFGRTSAPQ
QTEVCQAIFKKLLENNWLSENTMQQLYCDTCKRFLADRLVEGTCPKEGCDYKSARGDQCE
KCSKLLNPTELKDPRCKVCQKTPRIRDTNHLFLELPLLKDRLEEYINKMSVAGSWSQNAI
QATYAWLKEGLKSRCITRDLKWGVPVPHERYSDKVFYVWFDAPIGYVSITSCYTPEWEKW
WKNPENVELYQFMGKDNVPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKG
IGVFGNDAKDTNIPVEVWRYYLLNNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLS
FIAKPPGQGYGSVIPKPSDSDPDPLTHEPTKKLVCSIVECVEQYVEAMEKVKLKQGLKTA
MSISNEGNGYLQESQFWKLYKDDQPSCSLVIRTSAGLVYLLACLLEPFMPSFSLEVLKQL
NFPPETPFSLEKGDIDRASRPWDILPAGHKIGTPEPLFKELKDEEVEFFRTKFAGSQADR
IVRAEAEAEKMAEQLKKTKVSESSGKKQQNKKPASEAKGRASAEPEISIARLDIRVGLIT
SAQKHPDADSLYVEEIDVGEGQTRTVVSGLVKYIPLEEMQNRKVCVLCNLKPATMRGIKS
QAMVLAASNSDHTKVELVEPPKSAQVGERVTIPGFDGEPDDVLNPKKKVWETLQVDLHTN
TELVACYKDIPFTTSAGVCTVSSITGGSIR
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgtttccggccacgccgcaggggatcggaaggtccccaagcttccaatcgaa
ggcaagcggaacatcctcatcaccagcgccttgccttacgtcaacaacgtccctcacctc
ggcaacatcatcggctgtgtgctgagtgctgatgtgtttgcacggtactgccggcttcgc
agctacaatgcaatatacatgtgcggaacagatgagtacgggacggccacagagactaaa
gccatggaagagaatagcaccccaaaagagatttgtgacaaatactatgctatacataag
gaagtctatgagtggttcaatataagttttgataaatttggacgtacttcagccccacag
caaactgaggtttgccaagcaatttttaagaaactgttggagaacaattggctttcagag
aacacaatgcagcagctttactgcgacacatgcaaaaggttcttagctgaccggcttgtg
gagggtacctgcccgaaagaggggtgtgattacaagtctgcacgaggagatcaatgtgaa
aagtgcagtaagcttttgaatccaacagaattaaaagacccgcggtgcaaggtttgtcag
aaaacaccacgcattcgtgacacaaaccacttgtttcttgaactccctttgctgaaggac
agattggaagagtatatcaacaaaatgtcagtggctggatcttggagccagaatgctatt
caagcaacatatgcgtggcttaaagaaggcctgaaatcacgatgtattaccagggatctt
aagtggggggttcctgttccccatgagagatatagtgataaggttttctatgtctggttc
gatgcacctattggatatgtctcaatcacttcttgctacacgcctgagtgggagaagtgg
tggaagaatcctgaaaatgtggagctgtatcagtttatgggcaaggacaatgtgccgttt
cacaccgtgatgtttccatcaacacttcttggaactgaagaaaactggactttaatgaag
accatcagtgtcaccgaatacttgaattatgaagcaggaaaattttctaagagtaaaggt
attggagtttttggcaatgatgcaaaagatacaaacattcctgtagaagtatggagatat
tacttgctgaataataggcctgaggtatccgacacattatttacatgggctgacttgcaa
gcaaaactgaatagcgagttgctaaataacttgggaaactttataaatcgagttttgagt
ttcattgctaaacctccaggtcaaggatatggttctgttatccctaaaccttcagattct
gatccagatccgttaacacatgaacctactaagaaattggtttgtagcatagttgagtgt
gtggagcaatatgttgaggccatggagaaggttaaactaaagcaaggactgaaaactgca
atgagcatttctaatgaggggaatggatatctgcaagaaagccaattttggaagctttac
aaggatgaccaaccttcgtgctctcttgttataagaacttcagcggggctagtatatctt
cttgcatgtttgttagaaccttttatgccatctttttctctcgaggtacttaagcagctc
aattttcctcctgaaactcctttttcacttgaaaaaggagatattgatagggcaagcaga
ccttgggatatcctgcctgctggtcacaaaattgggacaccagagccattgtttaaggaa
ttaaaagatgaagaagtagaattcttcaggacgaagtttgcaggaagtcaagctgatagg
attgtgagggcagaagctgaagcagagaagatggctgagcaactgaagaaaacaaaagtt
tcagagagcagtggcaaaaagcaacagaacaagaaacctgcatctgaagccaaaggtagg
gcctcagctgagccagaaatttccattgcaagacttgacatccgtgttggccttattaca
agtgctcagaagcatcctgatgctgactcactatacgtggaagagattgatgttggtgaa
ggacagacccgtactgttgttagtggactcgtcaagtatatacctcttgaagagatgcag
aatcggaaggtgtgtgttctttgcaacctgaagccagctaccatgcgaggtataaaatca
caagcaatggttcttgctgcatccaacagtgaccacaccaaggttgagttggtcgagcca
cctaaatctgctcaagttggagaaagagttacaataccggggtttgatggtgagcctgat
gatgtcttaaaccctaaaaagaaggtctgggaaacattgcaagtggatctgcatacgaac
acagaactagtggcctgctacaaagatattcctttcaccacatcagctggtgtttgcaca
gtttcatccattaccggtgggtctattaggtag
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