Juglans regia (English walnut): 108993235
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Entry
108993235 CDS
T05245
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108993235
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
jre01002
]
108993235
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
108993235
03036 Chromosome and associated proteins [BR:
jre03036
]
108993235
03400 DNA repair and recombination proteins [BR:
jre03400
]
108993235
Peptidases and inhibitors [BR:
jre01002
]
Metallo peptidases
Family M67
108993235
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108993235
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
108993235
BRISC complex
108993235
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
108993235
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
108993235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
108993235
NCBI-ProteinID:
XP_018823621
UniProt:
A0A2I4EW47
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All DBs
Position
12:27861004..27869911
Genome browser
AA seq
438 aa
AA seq
DB search
MSLTCVKMSEDVWLTCMTHALSTETEEIMGLLLGDIEYSKDGSVTALIWGASPQTRSDRR
KDRVETNPEQLAAASAQAERMTTFTGRITRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDVHKVGRIQVIAFQSSDRKQNHASRPISLSVVNKSSIIDVESSLSSS
EDASTRSGSAVIESSEQDCGDSITAGANKGGGRSAELGVSFADSDAKYIGRERMGGNYRA
DSSDKIIVDIDPMDMSESMQEAMHRSNLDMSGAEYARKEIPLHVLPTSSLIKLDSPLMSF
TDLQHVLYEEERAAYNQAILQNIRGGKVHPLTFIHHTSTYQASLCKLMEYCLSPAVNALQ
DRLKENEIRLEMLINEAKRLAAECIRGGDSSLGSSRQVPSHGLRGNAVYGHTNSYSSAEP
VSMMTVASPGSQRRKGSR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacatgtgtgaaaatgtcggaagatgtgtggttaacatgtatgacgcatgca
ttgtccacagaaaccgaagagatcatggggcttcttctcggtgatattgagtactctaag
gatgggagtgtaactgcactgatttggggagcatcacctcaaacacgatctgaccgccga
aaggaccgtgtggagactaatcctgagcagttggctgctgcatcagctcaggccgagaga
atgaccacgtttactggaagaataacaagagtaattgggtggtatcattctcatcctcat
attacagttcttccttcccacgttgatgtgcgaactcaggcaatgtatcaacttttagac
tctgggtttatcgggctgatattttcctgttttagtgaagatgtacacaaggttggaaga
atccaagtaattgctttccaatcctcagataggaagcagaatcatgcgtcaagacctata
tctctatctgtggtaaataaaagttcaattatagatgttgaatcatctttaagttcctca
gaagatgcatctacaagatctggctctgcagtgatagagagctctgaacaagactgtggc
gattcaataactgctggagctaataagggtggtggaaggtctgcagagttgggggtttcc
tttgctgattcagatgccaagtatatagggagggaaaggatgggaggaaactatcgtgct
gatagttcagacaaaatcattgttgatatagaccccatggatatgtcagaaagtatgcaa
gaagcaatgcaccgttcaaatttggacatgagtggtgcggagtatgccaggaaagaaatt
cctcttcatgttttgccaacgtcatcccttatcaagcttgattcacctttaatgtcattt
acggacttgcaacatgtgctgtatgaagaggagcgggctgcatataaccaagccatattg
caaaatataaggggcgggaaagttcatcctcttactttcatacatcacacctcaacttat
caggcttccctgtgcaaattaatggaatattgtttaagtcctgccgtaaatgctctccag
gaccgcttgaaggagaatgaaattcggttagaaatgctcatcaacgaagccaagaggtta
gcggccgagtgtatcagaggaggtgattcaagtttgggatcatctcgccaagttccaagt
catggccttcgaggaaatgctgtgtatggtcacaccaactcgtatagttcagccgaaccg
gttagcatgatgactgttgctagtcctggtagccagaggcggaaagggtctcggtga
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