Juglans regia (English walnut): 108993348
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Entry
108993348 CDS
T05245
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108993348
Spliceosome [BR:
jre03041
]
Common components
Common spliceosomal components
General mRNP proteins
108993348
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
108993348
NCBI-ProteinID:
XP_018823778
UniProt:
A0A2I4EWK4
A0A833UAD8
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All DBs
Position
13:complement(6630752..6641031)
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AA seq
606 aa
AA seq
DB search
MDFDAYDYLEKTVENLEAQKDREDAVNGSGEIEKSREKDRSRRSKHRSDERDDYVERRSK
RSRSEDDSHDRDLHRERGSSRQRSRSRDGERDRHRSVREHKDKERDRDRYKDREERNGKE
RDKDRYREPDHDRGKDKRERVRESESEREREREREGSHRSRSRSDKHQSEHDERERSHDR
EYKEREMERELRERDRENRRYKEKKEEGTEPEADPERDQRTVFAYQISLKANERDVYEFF
SRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN
LVQSTTVVAGVSGGLIGPYSGGARRLYVGNLHFNMTEADLRQVFEAFGQVELVQLPLDET
GHCKGFGFVQFARLEDSRNALSLNQQLEIAGRLIKVSAVTDQTGLQDIGANSGDFDDDEG
GGLSLNARSRALLMQKLDRSGTASGISGSVGTPAVNGTGLTLPMAPVLGAAPVVSPGVAP
LPSIPALAGLGVGLQGPIATMPTVDTIGVPSECLLLKDMFDPKIETEPDFDLDIKEDVRE
ECSKYGNLKHIFVDKHSAGFVYLRFENTQAAAAAQRALHGRWFAGKMITATYMLPQAYET
KFPDSR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgcctacgattatttggagaaaactgttgaaaatcttgaggcccaaaaa
gacagggaggatgctgttaatggcagtggtgaaattgagaagtctagagagaaagatcgt
agtcgacgatcaaagcataggagtgatgagagggatgattatgtggaacgacggtccaag
cgctcaagatcagaagatgattcgcatgatcgtgatctacatagagagaggggttcatct
cgtcaacgatcgcggtcaagggatggggaaagggatcggcacaggagtgtccgggaacat
aaggataaggagagagatagggatagatataaggatagggaggagaggaacgggaaggag
agagacaaggatagatatagagagccggatcatgatcgaggcaaagataaaagagaacgt
gttcgggagagtgagagtgagagggaaagggagagagagagagagggatcgcatcgaagc
aggagtcgatctgataagcatcagagtgagcatgatgaaagagagaggagtcatgacagg
gagtacaaagaaagagaaatggaaagagagttgagggaacgagacagagaaaacagacga
tataaagagaaaaaggaggaaggaactgaaccagaggctgatcctgaacgggatcagagg
acagtatttgcttaccagatatctttgaaggccaatgaaagagatgtctatgagttcttc
tcaagagctggcaaggtgcgagacgtacgccttataatggatcgcaattcaaggcgttcc
aagggagttgggtatattgagttctatgatgcaatgtccgtccctatggctatagcactc
tctggtcagcttcttcttggtcaaccagttatggtgaagccatcagaagctgaaaagaat
ctggtccagtcaactacagttgtagctggtgtatctggtgggcttataggcccctattca
ggtggggctcgaaggctttatgttggtaatctacatttcaacatgactgaagctgatctt
cgtcaggtttttgaagcatttggtcaagtggagctggtgcagttgcctcttgatgaaact
ggacattgcaagggttttggctttgtccaatttgcacgccttgaggattctagaaatgca
ctgagtctgaatcaacagttggagattgcgggtcggcttatcaaggtttcagcagttact
gatcaaactggactgcaagatattggagccaattctggtgattttgatgatgatgaagga
ggtggcttgtcgctaaatgcacgttctcgagcacttctcatgcagaagttggatcgcagc
ggcactgcatctggaatttctggttctgttggcactcctgctgtcaatggcactggcctt
actttaccaatggctcctgtcctaggggctgctcctgtggtatctccaggagttgctccc
cttccttctattcctgctcttgctggacttggtgtaggccttcaaggtcccattgctacc
atgccaactgttgatacaataggtgttccaagcgaatgcttattattgaaggatatgttt
gatccaaaaattgagacggaacccgatttcgatttggatataaaagaagatgttcgagaa
gaatgttcaaagtacggaaatttgaagcatatttttgtagacaagcacagtgctggtttt
gtgtacttacgatttgagaacacacaagctgcagccgctgcacagcgtgctctccatgga
agatggtttgctggaaagatgattactgcaacatacatgctgccccaggcatacgagact
aagttccctgacagcagataa
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