Juglans regia (English walnut): 108993375
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Entry
108993375 CDS
T05245
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108993375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108993375
03009 Ribosome biogenesis [BR:
jre03009
]
108993375
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108993375
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108993375
Pre-60S particles
108993375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
TPR_IPO5
IBN_N
HEAT_MROH2B_C
HEAT_2
TOR1L1_N
TPR_DNAAF5
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
108993375
NCBI-ProteinID:
XP_018823809
UniProt:
A0A833X8A1
A0A2I4EWN7
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All DBs
Position
13:6741434..6770883
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AA seq
893 aa
AA seq
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MAASSAPWQPKEEGFREICGLLEQQISHSSSSADKSQIWQQLQQYSQFPDFNNYLAFIFA
RAEGKSVETRQAAGLLLKNNLRTEYKSMAPVNQQYIKSELLPCMGAADRHIRSTVGTIIS
VVVQLGGVLGWPELLQALVNCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAERPI
SIFLPRLYKFFQSPHASLRKLSLGSVNQYIMLMPTALYVSMEQYLQGLFVLAHDPASEVR
KLVCAAFVQLIEVRPSFLEPHLGNVIEYMLQVNKDNDAEVALEACEFWSAYCDAQLPPEK
LREFLPRLVPVLLSNMVYADDDESIVDAEEDGSLPDRDQDLKPRFHSSRLHGSDNVEDDD
DDIVNVWNLRKCSAAALDILSNVFGDEILPTLMPIVQAHLSTTGDAAWKEREAAVLALGA
IGEGCIHGLYPLLSEIVTFLIPLLDDKFPLIRSISCWTLSRFSKFILQGIGHQKGYEQFD
NVLMGLLRRILDPNKRVQEAACSAFATMEEEAAEELAPRLEIILQHLMCAFGKYQRRNLR
IVYDAIGTLADAVGGALNQPVYLDILMPPLIAKWQQLSNSDKEFFPLLECFTSIAQALGT
GFSQFAEPVFQRCISIIQTQQVAKVDPVSAGVQYDKEFIVCCLDLLSGLVEGLGSGIESL
VSHSNLRDLLLHCCMDDASDVRQSAFALFGDLARVCPIHLHPRLSEFLDVAAKQLNTPNL
RETLSVATNACWAIGELAVKVRQEVSPIVLTVISCLVPILKHAEELNKSLVENSAITLGR
VAWVCPEVVAPHMEHFMQSWCTALSMIRDDVEKEDAFRGLCAVVKVNPSGALGSLVFLCK
AIASWHEIRSEDLHNDVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKYQV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagtagtgccccatggcagcccaaggaggaggggttcagagagatctgcggg
ctcctggagcagcagatttcccattcctcttcctccgccgacaagtcccagatttggcaa
caactccagcagtactctcagttccccgatttcaataactacctcgctttcattttcgca
cgcgccgagggtaagtcggtggaaactcgacaagctgctggcctgctcttgaaaaataac
cttagaaccgaatataaatccatggctcctgtaaaccagcaatatataaaatcagagttg
ttgccttgcatgggagcagcggataggcacattagatctacagttgggaccattattagt
gttgttgttcaactagggggagttttgggatggcctgagttgttgcaagctctagtcaat
tgcttagacagtaatgacatcaatcacatggaaggtgctatggatgctttatccaagatt
tgtgaggatatccctcaagttcttgattcagatgtacctggcttagctgagcgtcctatc
agcatatttcttcctagattatacaagtttttccagtcaccacatgcctcattaagaaag
ctttccctgggttctgttaatcaatacattatgttgatgcccactgctttatatgtatcc
atggagcaatatcttcagggtttgtttgttcttgctcatgaccctgcctcggaagtgcgg
aaattggtttgtgcagcatttgttcagctaatcgaagtccgtccatctttcttggagcca
catctggggaatgtaattgaatacatgttgcaagtcaacaaggataatgatgctgaagtg
gctctagaggcctgtgaattttggtctgcatactgtgatgctcagttaccaccagagaag
ttacgagagttcttgcctcgtctagttccggtgttgttatccaacatggtttatgctgac
gatgatgaatccattgtggatgctgaggaggatgggtctctcccagatcgtgatcaggat
ctcaaacctcgttttcattcctcacgacttcatggatcagataatgtggaagatgatgac
gatgacattgttaatgtatggaatttgcggaagtgcagtgctgctgcccttgatatcctc
tcaaatgtgtttggggatgagattcttccaacattgatgcctatagttcaggcccacttg
tccaccacaggtgatgcagcctggaaagaaagggaagcagctgtcttggctcttggtgcc
attggtgaaggttgcattcatggtctatatcctcttttatctgagattgtcacatttctt
atccctcttttagatgataagtttccgctcattaggagtatttcgtgttggacactttct
cgcttcagcaaatttattcttcagggtattggacatcaaaaaggctatgagcagtttgac
aatgttcttatgggtcttttgcgaagaatactggatcctaacaagcgggtgcaagaggct
gcttgttcagcttttgcaacaatggaagaggaggctgcagaagagttggcaccacgcttg
gaaattattttgcagcatctaatgtgtgcttttgggaaatatcagagacggaacctcaga
attgtatatgatgctattggaaccttagcagatgctgttggtggggccctgaatcagccc
gtttatcttgacattctgatgccgccattaattgctaagtggcaacaactttcaaattca
gacaaggaattctttccgctgctggagtgttttacatctattgcacaggcattgggaacg
ggattctctcaatttgccgaacctgtatttcagaggtgcataagcatcattcagacacaa
caagtggcaaaggttgatcctgtttcagcaggggttcaatatgataaggagtttattgtt
tgctgtcttgatctgctctctggacttgtggagggtcttggcagtgggatagagagtctg
gtttcacatagtaatttgagagacctgcttctacactgttgcatggatgatgcttctgat
gtccgacagagtgcgtttgctctttttggggaccttgcaagagtatgtcccattcatttg
catccccgtttgtccgaatttcttgatgttgcagcgaagcaactgaacactcctaatctg
agggaaactctttcagtagcaactaatgcatgttgggccatcggggaactagcggttaag
gttcgtcaagaagtttctccaattgttttgacagttatttcatgcttagttccaatcctt
aaacatgcagaggagctcaacaagtcattggtagaaaatagtgcaataacacttggaagg
gttgcatgggtttgtccggaggttgtggcaccacatatggagcatttcatgcagtcttgg
tgcactgctttgtctatgatacgtgatgatgttgaaaaggaggatgctttcagaggacta
tgtgctgtggttaaagtaaatccatcgggggctttaggttcacttgttttcttgtgcaaa
gcaattgcgagttggcatgaaataagaagtgaggatctacataatgatgtttgccaggtg
ttgcatggttataaacagatgcttaggaatggagcgtgggaccaatgtatgtctgccttg
gagcccccagtgaaggacaaattatccaagtatcaagtgtaa
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