Juglans regia (English walnut): 108993466
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Entry
108993466 CDS
T05245
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108993466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108993466
Enzymes [BR:
jre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108993466
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108993466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
INTS1_RP2B-bd
Motif
Other DBs
NCBI-GeneID:
108993466
NCBI-ProteinID:
XP_018823942
UniProt:
A0A833TWR0
A0A2I4EX23
LinkDB
All DBs
Position
16:10104592..10157563
Genome browser
AA seq
1174 aa
AA seq
DB search
MVVKPNTTPDLEALRELFRHHIESFDYMSDKGLEILFQSIKGIHVHDSFTNKNLRIWVEN
PKLHRPAKELLSKTMHGDLLPYKCRQAKISYTGSLKADVYFQWDGGAPIAQEFDFGQFPI
MLKSKLCHLRDADPQKLVSKKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFS
DRREGYTDKAVVIRCERKNQSSVTVKVYYLRNGSARLGFWIQGREYLLPAGVVLKALVDT
TDHEIYESLTCCCSEKDEREKGAVATQLVGERAKIILDEVRNLSLFTRLQCLEHIGEHFQ
AAMDGLENESYSGVANAVLEEYIFVHLDNNYEKFNLLIFMLHKLFSLVDQTSVPDNPDSL
QNQEVLLPGHLITIYLKEKLEDWLRRAKKLLQDEINNKSKNFDFCNLAHVKKVLDKNPVK
QVSSAVENMLKTGRLVTKSGLDLQQRAGFTVQAERLNFLRFLSHFRAVHRGASFAGLRTT
TVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSNCRVTSYFGSEGDVRDFKKIRRDIRSFL
IGAGMMSLQPMLVKVGPPKFLSVLIDGHVVGSIASSLVENVVANLRKLKVSADTMIPDDL
EVGYVPLSLGGAYPGLYLFTSPARFVRPVRNILSPEKSQNIELVGPFEQVFMEIRCPDGK
DGGRQNAFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIHFR
ADQKLYHLQTPQTPIVRTSTYTRYGIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVER
GLCHGQIYQTETLDLSDQSSRSERSQRMFRRSNVDKSMHSLIDSDGLPYVGQMIRPNEPY
CCIYDEVTSSTKTNKRKGSEPVIVDYVAVDVKNKKPLQKVNIRFRHPRNPVIGDKFSSRH
GQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLKGKFLD
ATPFSSSVKKEDGETGPKPGSLVDELGEMLKEKGFNYHGLEVLYSGVYGTELTCEIFIGP
VYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKFGGGIRFGEMERDSLLAHGAAYLLHD
RLHTCSDYHIADVCSLCGSILTTSFLQQQKRAVREIGGLPPARAPKKVTCHACQTSKGME
TVAMPYVFRYLAAELAAMNIKMTLQISNSAELSN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcaagccgaatacgacgccggatctggaggctctgcgcgagctcttcaggcac
cacatagagtcgttcgattacatgtctgacaaaggactggaaatactattccagagcatc
aaaggcattcatgttcacgattctttcaccaacaagaacctcagaatctgggttgaaaac
cctaagttgcaccgtccggcaaaggagctgttatcgaaaacgatgcacggagacctgctt
ccttacaaatgtaggcaggctaagatttcgtacacggggagtttgaaggcggatgtttac
tttcagtgggacggtggagctcctattgcacaagaattcgattttgggcaatttccaata
atgttgaagtcaaagctttgtcatttgagagatgctgatccacaaaaactagtttccaaa
aaagaagagtcatcggaaatgggtggttactttatactgaatgggcttgagcgagttgtt
cgacttctaatattgccaaagcggaattatccaatgagtatggtgcggaattcatttagt
gatcggcgagaaggatatactgataaagcagttgtcataaggtgtgagagaaaaaatcag
tcttcagttacagtcaaagtatattaccttcgtaatggaagtgcgagacttggattttgg
atacaggggagggagtacttgcttcctgcaggcgtcgtgctaaaggctcttgtagacaca
actgatcatgaaatatatgagagtttgacatgctgctgtagtgagaaagatgagagagag
aagggtgctgttgccactcagctcgtgggtgaaagggcaaaaattattcttgatgaagtt
cgaaatctctctcttttcactcggcttcaatgtctagagcatattggggagcatttccaa
gctgccatggatgggctggaaaacgaaagttattctggtgttgctaatgctgttcttgag
gagtacatctttgttcacctcgataacaattatgagaagtttaatctgctcatctttatg
ctgcataaacttttctcacttgtggatcagacatctgtgccagacaacccagattccttg
caaaatcaggaagtcttactccctggtcacttgattaccatttatctcaaggaaaaacta
gaagattggctgcgcagggcaaaaaagcttcttcaagacgagatcaataataagagcaaa
aattttgatttctgcaacttagctcatgtcaagaaggttttggataaaaatcctgtcaag
caagttagttctgctgttgaaaacatgttaaaaaccggaagactggttactaaatcaggt
ctagatttgcagcagcgggcaggctttacggttcaggcagagaggcttaatttcttacgt
tttctctcacattttcgtgctgtccatcgaggggcttcatttgctggacttcggaccaca
actgtgcggaaattgttacctgaatcttggggttttctttgccctgtgcatacacctgat
ggggaaccatgtggcttgttgaatcatatgaccagcaattgtcgagttacgtcatacttt
ggttctgaaggagatgtaagagattttaagaaaataagaagggatattcgcagctttttg
attggtgctggaatgatgtcgctacagccaatgctagttaaagttggtcctcccaagttt
ctttcggtccttatagatggtcatgttgttggttctatagcttccagtttagttgaaaat
gttgtggccaacttacggaaattaaaagtgtcagccgatacaatgattccggatgatctg
gaagtgggatatgttcctttgagtctgggaggagcatatcctggtttgtacctcttcaca
tctcctgctagatttgttcggccagttagaaatattttgagtcctgagaaaagtcagaac
atcgaactcgttggtccttttgaacaggtatttatggaaataagatgtcccgatggaaaa
gatggtgggagacaaaatgcttttcctgcaactcatgaagaaatccatccaactggaatg
ctcagtgtggttgctaatcttacaccttggtcagatcataatcagagcccgcggaatatg
taccagtgtcaaatggcaaaacaaacaatggctttctcttcacaagcaattcactttcgt
gcggaccaaaagctataccatcttcagactcctcaaactcctattgtgcgaacaagtaca
tatacgaggtacggcattgatgaatatccaacaggaacaaatgcaatagttgcagtgcta
gcatatacaggatatgacatggaggatgccatgatccttaataaatcatctgtggagcgt
ggattgtgccatggacagatataccagacggaaactcttgacttgtctgatcagagcagc
cggtcagaacgttcccagagaatgtttagaagaagcaatgtggacaaatcaatgcattct
ttgattgattctgatgggcttccatatgttggtcagatgatacgaccgaatgaaccctat
tgttgcatttatgatgaggtaacaagttccacaaaaaccaacaaacggaagggttcagaa
cctgttatagttgactatgttgctgttgatgtgaaaaacaagaagccgcttcagaaggtg
aatatacgttttcgacatcctagaaaccctgtcattggggacaaatttagcagtagacat
ggtcagaaaggtgtttgctcgcaattgtggccagacatcgatatgccattttctggagtt
actgggatgcgtccagatctgattattaacccgcatgcatttccatcaaggatgacaatt
gcaatgcttttggagtctgttgctgctaagggaggtagcttgaaaggaaaatttttagat
gccacaccattttctagttcagtcaagaaagaagatggggagactggaccaaagcctggt
tcccttgttgatgagcttggtgaaatgttaaaagaaaaagggttcaattaccatggattg
gaggtattgtacagtggggtttatggaacagaacttacgtgtgagatatttattgggcct
gtttattatcagagactccgacacatggtttcagacaaatttcaggtccgttctactgga
actgtagaccaggtcacccggcagcctattaaaggacgaaagtttggtgggggtattcgt
tttggagaaatggaacgagactctttgcttgcacacggggcagcatatttgttgcatgat
aggctccatacctgttctgattatcacattgctgacgtatgttctctatgtggaagcatc
ctcacaacttcattcctccagcaacaaaagagagcagtgcgggagattggtgggctaccc
cctgctagggcacccaagaaggtcacttgtcatgcttgtcagacgagtaaaggaatggag
acggttgcaatgccctatgtcttccgatatttggctgcagagttggcagctatgaacata
aaaatgaccctccagataagcaatagtgccgaactgtcaaattaa
DBGET
integrated database retrieval system
