Juglans regia (English walnut): 108993564
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Entry
108993564 CDS
T05245
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial-like isoform X1
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03030
DNA replication
jre03410
Base excision repair
jre03420
Nucleotide excision repair
jre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108993564
03410 Base excision repair
108993564
03420 Nucleotide excision repair
108993564
03440 Homologous recombination
108993564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jre03032
]
108993564
03400 DNA repair and recombination proteins [BR:
jre03400
]
108993564
Enzymes [BR:
jre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108993564
DNA replication proteins [BR:
jre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
108993564
DNA repair and recombination proteins [BR:
jre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
108993564
NER (nucleotide excision repair)
GGR (global genome repair) factors
108993564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
108993564
NCBI-ProteinID:
XP_018824081
UniProt:
A0A2I4EXF4
LinkDB
All DBs
Position
9:complement(23114430..23124733)
Genome browser
AA seq
1073 aa
AA seq
DB search
MAMGLCTQTGPIRPSCPTYPMFSRSCSRPSSTSRFLWASSRALRTRGRCTFRNDRNYHTE
SCCWRLLPHSNSIAKMVLDYRDHENSNGSLTRKRINAIRRVDKEGEQVQSGFIVPPAQDV
GGSSPDKPRAFDTVSESTVPGCQWAKEAKRLRVRRELLLKIFKYSSYLPHETSSQENIFS
TTGGRQIVAPDFASDPVSPELKCSGDSNIAVKDMNGLKLDQSRQGLCSADNRRKVALPSA
DASRNSEEIKQTSSGFTNGLIKTATSEQTNHQSDLHKRLGSIYDGVLVVNNVSVAKEVVR
VLTNKYRHLVHACDTEVAKIDVKQETPVDHGEIICFSIYSGPEADFGNGKSCVWVDVLDG
GGSDLLVEFSPFFEDPSIKKVWHNYSFDNHVIENYGIKLSGFHADTMHMARLWDSSRRTE
GGYSLEALTGNKRVMSGSPFCDEEELFGKVSMKTIFGKRKVKKDGSEGKMIYISPVEELQ
REERKLWICYSVLDAKSTLKLYESLKSQLSTMPWKLDGKPVSGKSMYDFYKEYWQPFGDL
LVKMETEGILVDRAYLAEMEKIAKAEQEIAAKRFRNWASKYCSDAKCMNVGSDAQLRQLF
FGGIANRKDSDEVLPNERIFKVPNVDKVIEDGKKSPTKFRNIRLHSILGFPLPADMFTAT
GWPSVSGDALKTLAGKVSAEHGLMNDACDLQLDENIENVSENEVSEKENSTSGIDKSAYG
TAFLAFKEEWEGREACHAIAALCEVCSIDSLISNFILPLQGSNISGKNGRIHCSLNINTE
TGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQLELRILAHLASCKSMLD
AFRAGGDFHSRTAMNMYPYIREAIDKKQVLLEWHPQPGEDKPPVPLLKDAFASERRKAKM
LNFSIAYGKTPVGLARDWKVSVREAKKTVDLWYSDRQEVLTWQEKRKQEARDQQFVCTLL
GRARRFPSMAHATSYQKGHIERAAINTPVQGSAADVATCAMLEISKNARLKELGWKLLLQ
VHDEVILEGPTETAEVAEAIVVECMSKPFNGKNILKVDLSVDAKCAQNWYSAK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggctatggggctgtgcacccaaaccggtcctataagaccgtcttgcccgacttatccc
atgttttcacggtcttgttcccgaccttcttccacttctcggttcctctgggcttcctct
agagccctgcgcacacgaggaagatgcacattccggaatgataggaattatcacacggaa
tcgtgttgttggaggctcttgccacattctaattcaatagctaagatggtccttgactat
agagatcatgaaaattccaatggaagtctcacacggaaaagaattaatgctatccgaagg
gtagataaagaaggggagcaggttcaaagtggttttattgtaccaccagctcaagatgtt
gggggaagtagtcctgacaaacccagagcttttgataccgtgtctgaaagtactgtgcct
ggatgccaatgggcaaaagaggcaaaaaggctgagagttagaagggaacttctgctgaaa
atttttaaatatagtagttatctaccccatgaaacaagtagtcaagaaaacatattttct
acaactggtggaaggcagattgttgcacctgactttgcttctgacccagtttctcctgaa
ctaaagtgcagtggagacagcaatatagccgtgaaagatatgaatggtctaaaacttgac
cagtcaaggcaaggtctatgttcagcagacaatagaagaaaggttgccctgcccagtgct
gatgcatcaaggaactcggaggaaataaaacaaacaagttctggctttactaatggttta
atcaaaactgccaccagtgaacagacaaatcaccagtcagatcttcataagaggctcggt
agcatctatgatggtgttcttgttgtcaataatgtctccgtagcaaaggaggttgttagg
gtgcttacaaataagtacagacatcttgtccatgcatgcgatactgaggttgcgaagata
gatgtgaagcaagaaacacctgttgatcatggggaaatcatatgcttcagtatatattct
ggaccagaagcagattttggaaatgggaagtcttgtgtttgggttgatgttcttgatggt
ggtggtagtgatcttttggttgagttttcccctttctttgaagacccatccataaaaaag
gtttggcacaactatagctttgataaccatgttattgagaactacgggattaagctttct
ggttttcatgccgacacaatgcatatggcacggctgtgggattcgtcacgacgaactgag
ggtgggtattctcttgaagcacttactggcaacaaaagggttatgtctgggtctccattt
tgcgacgaagaagagttatttggtaaagtttcaatgaaaaccatctttggaaagagaaag
gttaaaaaagatggatcggaaggcaaaatgatttacatttctcctgttgaagagctgcaa
agagaagagcggaaactgtggatatgttattccgtcttagatgcaaagagcacactaaag
ctttatgagagcttgaaaagtcaactatcaactatgccatggaaacttgacggaaaacca
gtttctggaaaatccatgtatgacttctacaaggaatattggcaaccatttggtgatcta
ttagttaaaatggaaactgaaggaatactggttgatcgagcatatcttgctgagatggaa
aagatagccaaagcagaacaagagattgctgctaaaagatttcgcaactgggcatccaaa
tattgctccgatgccaaatgcatgaatgtgggaagtgatgcacaactacgccagctcttt
tttggtggcattgcaaacagaaaggattctgatgaggttcttccaaatgagaggatcttc
aaagtacctaatgttgataaagtaattgaagatggcaagaagagtcccacaaaatttcgg
aatattaggctgcatagcatccttggttttccactaccagctgatatgttcacagcaact
ggttggccctcagttagtggtgatgctttgaagactctggctggaaaagtttctgcagaa
catggtttgatgaatgatgcttgtgacttgcaactggatgaaaacattgaaaacgtctct
gaaaatgaagtttcagaaaaagaaaattcaactagtggtatcgacaaatctgcttatgga
acggcttttctagcttttaaagaagagtgggaggggagggaagcttgccatgccattgct
gctttatgtgaagtttgctccattgactccttgatatccaatttcatactccccttgcag
ggaagtaatatatcaggcaagaatgggcgcattcattgttcattgaatatcaatacagaa
actgggcgcttatcagctaggagaccaaatttgcagaatcagcctgccctagagaaggac
cggtataagatccggcaggcattcatagctgcacctgggaattcacttattgttgcagat
tacgggcaactggaacttaggattcttgcacatcttgctagttgtaagagcatgctggat
gcctttagagctggtggagatttccattcaaggactgcaatgaatatgtacccatatatt
cgtgaagctattgacaaaaagcaagtgcttctcgagtggcatccccaacctggtgaagat
aaacccccagttccgctattaaaggatgcctttgcttctgaaagaaggaaagcgaaaatg
cttaacttttccattgcatatggaaagactccggtggggcttgcccgagattggaaggtt
tctgttagggaagcaaagaaaactgttgatctgtggtacagtgatagacaagaagtgcta
acctggcaagaaaagcgtaaacaagaagcccgtgatcaacagtttgtatgcacactactg
ggacgtgcccgccggttcccttcaatggcccatgctacctcctatcagaaaggtcacatt
gagcgagctgctatcaatactccagtgcagggtagtgctgctgatgttgccacgtgtgcc
atgctagaaatatcaaaaaatgcacgattgaaggagcttgggtggaagctgcttttacag
gttcatgacgaagtaattttggaaggaccaacagagacagctgaggtcgcagaggccata
gttgttgagtgtatgtccaaacccttcaacggcaagaatatccttaaagttgacttatct
gttgatgcgaagtgtgctcaaaactggtattctgccaagtag
DBGET
integrated database retrieval system