Juglans regia (English walnut): 108993627
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Entry
108993627 CDS
T05245
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108993627
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108993627
Factors involved in mRNA localization
Other mRNA localization factors
108993627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
108993627
NCBI-ProteinID:
XP_018824152
UniProt:
A0A2I4EXN8
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All DBs
Position
11:complement(16570551..16626317)
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AA seq
1285 aa
AA seq
DB search
MTVPVEEAIAALSTFSLEDEQPDVQGPGVWVSTERGATESPIEYSDVSAYRLSLSEDTKA
LNQLNALIQEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPTITHLWSMLKVLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSIQWQDTDSMREELDDLQIFLSTRWAILMNLHVEMFRVNNVEDILQVLIV
FAVESLELDFTLLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSMYFQKFSAQTRLLGLPAPHELPPREAQDYQRQYLIINHIGAI
RAEHDDFVLRFASSLNQLLLLKSTDSADIEWSKEVKGSMYDVIVEGFQLLSRWNARIWEQ
CAWKFSRPCKDPVPLELHETPTSFSDYEKVVRYNYGAEERKALVELVSYIKSIGSMMQRC
DTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKPE
SELQSLQHGGDESKGNFFYPRPVAPTAAQIHCLQFLIYEVVSGGNLRKPGGLFGNTGSEI
PVNDLKQLESFFYKLSFFLHILDYTATVATLTDLGYLWFREFYLESSRVIQFPIECSLPW
ILVEYVLESRNAGLLESVLMPFDIYNDSAQQALVVLKQRFLYDEIEAEVDHCFDIFISKL
CEAIFTYYKSWAASELLDPSFVFALDNGEKYSVHPMRFTALLKITRVKLLGRSIDLRCLI
VEWMNKAFRENLEFLFDRFESQDLCAIVELEKLLDILKQTHELLSKDLSIDSFSLMLNEM
QENISLVSFSSRLSSQIWSEMQSDFLPNFILCNTTQRFIRSSKVPLVSVQKPSVPHAKAN
FYCGTQDLNSAHQSFARLHSGFFGMPHMFSMARLLGSRSLPWLIRALLDHISNKIATIEP
MITGLQEALPKSIGLLPFDGGVAGCMRLVKEHLNWGKKSELKAEVLRGIKEIGSVIYWMG
LLDIVLREVDTTHFMQTAPWLGLFPGADGQILHNEDGGGSPVVNLFASATAAIASDPNCP
NPMSFHTVSKQAEAADLLYKANMNTGSVLEYTLAFTSAALDKYCSKWSTAPKTGFIDITT
SKDFYRIYSGLQIGYLEETTQALSNNTEVLGDSVAWGACTVVYLLGQQLHFELFDFSYQV
LNVAEVEAASITQTHKVHFAQGWEALLEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQ
SGAPLHRIKFENTVSAFETLPQKGA
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgactgtccctgttgaggaagccatcgcagctctttctacattctcgctagaggatgag
caaccagatgtacaaggaccaggagtttgggtgtcgactgagagaggtgcaaccgagagt
ccaatcgagtacagtgacgtttcagcataccgcctgtctctgtcggaggatacaaaggcg
ctaaaccagctgaatgcccttatccaagaggggaaggagatggcatccgtgctttatacc
tatcgcagttgtgtcaaggcgcttcctcagcttcctgattctatgaagcaaagtcaagct
gatttgtatctagaaacataccaagttttggacttggagatgagtcgtctccgtgaaatt
cagcgctggcaagcatcagctgcatcaaaactagctgctgatatgcagcgcttctctaga
cccgaacggcgcataaatggaccgacaatcactcatctctggtccatgttgaaggtactt
gatgtcttggtgcaactcgatcatctaaaaaatgctaaagccagcatacctaatgatttc
tcttggtataagaggacattcacacaagtcagtattcaatggcaagacaccgattcaatg
agggaggagttagatgatttgcagattttcttaagcacgaggtgggctatcttaatgaat
ttgcacgttgagatgtttcgtgtgaacaatgttgaagacattcttcaagttctcatagtc
tttgcagtcgagtcgttagagttggatttcacacttctgtttcctgagcgacacattctt
ctacgcgttttgcctgttcttgttgtcttagcaacatcctcggagaaagacagcgagtct
ctatacaagagggtgaaaattaacagactgataaatatatttaagaacgatccagtcatt
cctgcatttccagatcttcatctttctcctgctgcaatcttgaaagagttgtcgatgtac
tttcaaaaattttctgcccaaactcgtcttctcggtcttccagcacctcatgagcttcct
ccccgtgaggcacaagattatcagagacagtatctgatcattaatcacatcggagcaatc
cgtgctgagcatgatgattttgtactccgttttgcttcatcattgaatcagctattgttg
ttaaagtcaacagatagtgctgatattgagtggagcaaagaagttaagggaagcatgtat
gatgtaattgttgaaggttttcagcttttaagcagatggaatgcacgcatttgggaacaa
tgtgcgtggaaattttctcgcccatgcaaggatccagttcctttggaattacatgagact
ccaacgtcattttctgactatgaaaaggttgtacggtataattatggtgcagaggaaagg
aaagcacttgttgaacttgttagctacataaagagcattggatccatgatgcagcggtgt
gatacattggtagccgacgcattatgggaaacaatacatgctgaggtccaagattttgtc
caaaacacattggcaactatgttgcgaactaccttccgaaagaagaaggacctttcaagg
attctttccgatatgaggaccctttcagcagattggatggcaaatacaagcaagcccgaa
tcagagttacaatctttacagcatggaggcgatgaaagcaaagggaacttcttttatcca
aggccagttgcaccaacagctgctcagatacattgtttgcagttcctgatatatgaggtg
gtctctggaggtaaccttcggaagccagggggtctctttgggaatactgggtctgagatt
cctgtcaatgatttgaaacagttggaatcctttttttataagctcagcttctttcttcat
attttggactacacagctactgttgcaactttgacggatcttgggtacttgtggttcaga
gaattttatttagagtcttctcgtgttattcagtttcccattgaatgctctcttccctgg
attctggtggagtatgtgcttgagtcacggaatgctggtcttcttgagagtgttttgatg
ccatttgatatctataatgactcggctcagcaagcactggttgtattgaagcaacgcttc
ctctatgatgaaattgaggctgaggtggatcattgtttcgatatatttatttcaaaactt
tgtgaggctattttcacatactacaagagttgggcggcaagtgagttacttgacccatca
tttgtcttcgccttggacaatggagaaaaatattctgtccatcctatgagattcactgcc
cttctaaagattacaagagtgaagttactggggaggagcattgatttaagatgtctgatt
gttgagtggatgaacaaagctttccgggagaatcttgagttcctgtttgatcgttttgag
tctcaggatctatgtgccatagtggaattagagaagctgcttgatatcttaaaacagacc
cacgaattgctatccaaagatctttcaatagactcattcagtcttatgttgaatgagatg
caagaaaatatctctcttgtgtcattttctagtcgactctcttctcagatctggtcggag
atgcaaagtgactttttaccaaattttatcctttgcaatactactcagcgttttatccga
tcatcaaaggttcctctagtttctgttcagaagccatcagttccccatgctaaggctaac
ttctattgtggtacacaagatttgaattctgctcatcaaagttttgcacgactccatagt
ggattctttggaatgcctcacatgttttccatggcaagactactgggatcaagatcattg
ccttggctgattcgagcacttctagatcatatatccaataagatagctacgatcgaacca
atgattacagggttgcaagaagcactgccaaaatctattggattgcttccttttgatgga
ggtgtggcaggttgtatgaggcttgtgaaagaacatcttaattgggggaagaaatcagag
ctcaaagcagaagttcttcgtgggataaaggagatcggaagtgtcatatattggatggga
cttcttgatattgtgttgagagaagtggataccacacatttcatgcaaacagcaccttgg
ttgggcttgtttcctggtgcagatgggcaaatattgcataatgaagatggtggaggcagc
cctgttgtcaacctctttgcatccgccactgctgcaattgcatcagatcctaactgtcca
aatccaatgtctttccacaccgtatcaaaacaggcagaagctgcagatctcttatacaag
gctaacatgaatactggaagcgtgctggaatatacccttgctttcacaagtgcagcactg
gataaatattgtagtaagtggagtactgctccaaagacagggtttatcgacattacaaca
tcaaaggatttctaccgtatatatagcggccttcaaattggatatcttgaagagactact
caggcattatcaaacaataccgaagtgctgggtgattcggttgcctggggtgcttgcacc
gtagtatacttgcttgggcaacagctgcatttcgagctttttgatttttcatatcaagtc
ctcaatgttgcagaagtggaggctgcatcaataacacagacacataaagttcattttgct
caggggtgggaagcactattagaagcaatgaagaaagcaaggagactgaataatcacgtg
ttctccatgctgaaagcacgttgcccccttgaagacaagacagcttgtgctatcaagcaa
agtggtgcccctctgcataggattaaatttgagaatacagtctctgcatttgaaacgctg
cctcagaaaggagcctga
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