KEGG   Juglans regia (English walnut): 108993634
Entry
108993634         CDS       T05245                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
jre  Juglans regia (English walnut)
Pathway
jre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108993634
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    108993634
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     108993634
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     108993634
SSDB
Motif
Pfam: EXOSC1 ECR1_N ECR1_N_2 RRP4_S1
Other DBs
NCBI-GeneID: 108993634
NCBI-ProteinID: XP_018824159
UniProt: A0A833UCF8 A0A2I4EXN3
LinkDB
Position
11:complement(16794330..16816024)
AA seq 197 aa
MKEEGEREVVTPGEVLGKASDVRAGRGAYLASHNNLVYASLTGFRRALSPSPDSPDQRPT
VEITDHKAHGAIPEPGSVVIARVTRVMAKMASADIMCVGPKSVREKFSGIIRQQDVRATE
IDKVDMHLSFRPGDIVKAIVLSLGDARAYYLSTAKNELGVVSAESTAGATMVPISWTEMQ
CPLTAQIEHRKVAKIGV
NT seq 594 nt   +upstreamnt  +downstreamnt
atgaaagaagagggagagcgagaggtggtgacacctggggaagtgctggggaaggcatcc
gatgtaagagcagggagaggtgcctacttggcgtcccacaacaacttggtctacgcgtca
ctcaccggcttccgccgcgccttatccccttcccccgactcccccgaccagagacccact
gtggaaataactgatcacaaggcccatggtgccattccagaaccgggatccgttgttatt
gccagagttacgagagttatggctaagatggcttcagctgatatcatgtgtgttggtccc
aagtctgttcgagaaaaattcagtggcataattaggcaacaagatgtaagagcgactgag
attgacaaagtggatatgcacttatcctttcggcctggtgacattgtcaaagctattgtg
ctatcccttggagatgcacgagcctattatctatcgactgcaaagaatgaattgggtgtt
gtgtctgcggagagtacagcaggtgcaacgatggttccaataagttggaccgagatgcaa
tgcccattaacagcccaaattgagcacagaaaggttgctaagattggagtttga

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