Juglans regia (English walnut): 108993634
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Entry
108993634 CDS
T05245
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108993634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108993634
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108993634
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108993634
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
108993634
NCBI-ProteinID:
XP_018824159
UniProt:
A0A833UCF8
A0A2I4EXN3
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All DBs
Position
11:complement(16794330..16816024)
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AA seq
197 aa
AA seq
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MKEEGEREVVTPGEVLGKASDVRAGRGAYLASHNNLVYASLTGFRRALSPSPDSPDQRPT
VEITDHKAHGAIPEPGSVVIARVTRVMAKMASADIMCVGPKSVREKFSGIIRQQDVRATE
IDKVDMHLSFRPGDIVKAIVLSLGDARAYYLSTAKNELGVVSAESTAGATMVPISWTEMQ
CPLTAQIEHRKVAKIGV
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagagggagagcgagaggtggtgacacctggggaagtgctggggaaggcatcc
gatgtaagagcagggagaggtgcctacttggcgtcccacaacaacttggtctacgcgtca
ctcaccggcttccgccgcgccttatccccttcccccgactcccccgaccagagacccact
gtggaaataactgatcacaaggcccatggtgccattccagaaccgggatccgttgttatt
gccagagttacgagagttatggctaagatggcttcagctgatatcatgtgtgttggtccc
aagtctgttcgagaaaaattcagtggcataattaggcaacaagatgtaagagcgactgag
attgacaaagtggatatgcacttatcctttcggcctggtgacattgtcaaagctattgtg
ctatcccttggagatgcacgagcctattatctatcgactgcaaagaatgaattgggtgtt
gtgtctgcggagagtacagcaggtgcaacgatggttccaataagttggaccgagatgcaa
tgcccattaacagcccaaattgagcacagaaaggttgctaagattggagtttga
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integrated database retrieval system