Juglans regia (English walnut): 108994138
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Entry
108994138 CDS
T05245
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jre03009
]
108994138
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108994138
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
90S particles
Helicases
108994138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
WHD_HA2
DEAD
HA2_C
AAA_22
nSTAND3
ATPase
ResIII
AAA_23
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
108994138
NCBI-ProteinID:
XP_018824780
UniProt:
A0A833X9H0
A0A2I4EZF2
LinkDB
All DBs
Position
11:complement(25029444..25038019)
Genome browser
AA seq
1345 aa
AA seq
DB search
MSEMELRRESSGQALELNRGKRSWSLEDSDSNALILPEKKRNKKKGVDKECKRIRMDKNP
KLSKAQKRKLKKLEEEKEKALWLSKSIETLEKYKLPEDAFHLLLSSRDIGRAETMKEKHR
RAVHFSKAGLEVPDWDKPFERKGGDSATGGTELEGDGISLRQDFNEDDSLQPMILRGEAP
KILSKTDKIPSRKDFNKDDLFQPMILERESQNYESVPLDSSQGAVRCIENSGSDKADVSQ
KVDYSGKFNTQGCPAQEPLSIPTVVHVSRPNEIQNTRKDLPIVMMEQEIMEAINDHSAVI
ICGETGCGKTTQVPQFLYEAGFGSSQSSTKRGIIGVTQPRRVAVLATAKRVAFELGFHLG
QEVGFQVRYDKRIGESCSIKFMTDGILLREVQNDFLLKRYSVIILDEAHERSLNTDILIG
MLSRIIKIRQDEYEKQQQIVRTGQSVSPDDVISPLKLVLMSATLRVEDFISGRRIFNDPP
PVIEVPTRQYPVTIHFSKRTEIFDYIGQAYKKVLAIHKRLPHGGILVFVTGQREVNHLCR
KLSKASKELVVKTLRKDVGTDGTGVSQTKSVEDINMKEINDAFDFDGNSIHQYTDRFSSY
EEDECDIDEDDSDVSYDSETESELEIDDDVDGDPSRQTTKEDDRNLLNVLGEDGSLASLK
AAFETLAGKPALNSSDGKHAPLSSPEGCLDQSNPSIGNKRGEKDPSLGNKRGEKGFCAGI
LRVLPLYAKLSAADQLCVFKEVQEGERLVVVATNVAETSITIPGIKYIVDTGREKVKAYN
SSNGMETYQVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNILPDFSLAEISKMPVD
GVVLLMKSMRIDKVQNFPFPTPPKITALVEAEQCLKALEALHSNGKLTPLGKAMARFPMS
PRHSRMLLTVIQTMRMVNCYARANLVLGYAVAAAAALSLSNPVVLQFEGSDVNKDDLEHD
EKSGTQVDREVIGKQEKLRRKKQKETAKMFHAKFSNPNSDTLTIAYALQCFELSGSPVEF
CNDNALHLKTMEEMSNLRRQLLQLIFEKGLCGTEQDFSWIHGTQDEVERAWRVSSNNPPL
LLNEEELLGQAICAGWVDRVAKRIRGASRLSEGDTKTHAVRYQACMVKETVFLHRWSSVS
SSAPEFLVYSELLQTKRPYMYGVTSVKPEWLVKYASSLCTFSSVLTDPKPYYEPQSDQVF
CYVIPTFGPHLWELPLHSLPITNDMQRVTVFAYALLEGKVLPCLGSVRKFMSAPPSSILR
PQASGQKRVGNLLNKLKTKLIDSCSMLREVWMENPNELHSEILGWFQESFHKHFQVLWSK
MHGEILLEPQERFPKRGRVKSKSKK
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagatggagctccgtcgggaaagttcgggacaagcgttggagttgaatcgtgga
aaacgttcgtggagtttggaagattctgatagcaatgcactaatcttgcctgaaaagaaa
aggaacaaaaagaaaggcgttgataaggaatgcaaaagaattagaatggataagaatccc
aagctgagcaaagctcagaaaaggaagttgaagaagttagaggaggaaaaggaaaaagca
ctttggctgtcaaaaagcattgagaccttggagaagtacaagcttccggaggacgcattt
catcttctgctatcttcacgagatattggtcgtgctgaaaccatgaaggaaaaacatagg
agggctgtgcacttttctaaggcaggattagaagttccagattgggacaaaccttttgaa
agaaagggtggtgattctgccactggtggaactgaacttgagggggacggaatttcttta
aggcaggatttcaacgaggatgattcattgcaaccaatgatacttagaggagaagccccg
aagattctgtctaaaacagacaagattccttcaaggaaggatttcaacaaggatgattta
ttccaaccaatgatactggaaagagaatcccagaattatgaatctgttcctttggactct
tctcaaggggcagttcggtgcattgaaaacagtggatcagataaggcagatgtgagccaa
aaggttgattacagcgggaaatttaacacacagggttgtcctgctcaagaacctttatct
atcccaactgtcgtgcatgtatctaggccgaatgagattcagaacactaggaaggatctt
ccaatagtcatgatggagcaggagataatggaagctataaatgatcattcagctgtgatc
atatgtggagagactgggtgtggtaaaactactcaagttcctcagtttctttatgaagct
ggctttggttcaagccagtccagtactaaaagagggattatcggtgttactcaaccgcgc
cgtgttgctgtacttgccactgccaagcgagtggcatttgagcttggtttccatctaggt
caagaggttgggtttcaagttaggtatgacaagaggattggagagagttgctcaatcaag
ttcatgactgatggaattttactacgagaagttcagaatgattttttgctgaagcgttat
tctgtcataattcttgatgaagctcacgagagaagcttgaacacagacatactgattgga
atgctttctcgtataattaaaattcgccaggatgaatatgagaagcagcaacaaattgtg
cgtacaggacaaagtgtaagtccagatgatgtgatttctccattaaaacttgtgctgatg
agtgccaccttgcgagtggaagattttatttctgggagaaggatatttaacgatcctcca
cctgttatagaagttccaactagacagtatccggtaaccatacacttctcaaagagaaca
gagatctttgattatattggtcaagcatataaaaaggtcttggcaattcacaagaggctg
ccacatgggggtatacttgtctttgtcactggccagagggaagtaaaccacttgtgtcgg
aagctatctaaagcttcaaaggagctggttgtgaaaacattaaggaaggatgttggaact
gatggcactggggtctcccaaacaaaatctgttgaagacataaatatgaaggagattaat
gatgcatttgactttgatgggaattcaattcaccagtatactgacaggtttagctcttat
gaggaagatgagtgtgatatagatgaggatgactcagatgtttcttatgattcggaaaca
gagagtgaactggaaattgatgatgatgttgatggggacccatcccgtcagaccaccaaa
gaggatgatcgcaatctattaaatgttttaggggaggatgggagccttgcttcactaaaa
gctgcttttgaaactttggctgggaaacctgcattaaactcttctgatggtaaacatgcc
ccactttctagtccagaagggtgcttagaccaatccaatccaagcatagggaacaaaagg
ggggaaaaagatccaagcctagggaacaaaaggggggaaaaaggtttctgtgctggtata
ttgcgtgttctgcctctttatgccaagctgtctgctgctgaccagctttgtgtttttaaa
gaagtacaggaaggagagagacttgtggttgttgccactaatgtggctgaaacctctata
accatcccaggcatcaagtatattgttgatactgggagagaaaaggtgaaggcctacaac
tcctccaatggcatggaaacataccaagtacagtggataagtaaggcatcggctgctcaa
cgtgcaggaagagctggaagaactgggcctggccactgttatcgtctctactcttctgca
gtttttagtaatatacttcctgacttttctcttgctgaaatatctaaaatgccagttgat
ggcgttgtccttctcatgaaatccatgcgtatcgataaggttcaaaactttccatttcca
actcctcccaagatcactgcattggttgaagcagagcagtgcttgaaggctctagaagct
cttcatagcaatggcaaattgacacccttagggaaagccatggctcgttttcccatgagt
ccacgccactcccggatgctccttaccgttattcagactatgaggatggtgaattgttat
gcccgtgcaaatctagttttgggatatgcggttgcagcagctgcagctttgagtttgtca
aatcctgttgtcttgcagtttgaaggaagtgatgtgaataaagatgacctagagcatgat
gagaaatctggtactcaagtcgaccgggaagtcattggcaagcaagaaaaattgaggaga
aagaaacagaaagaaactgcaaaaatgttccatgcaaaattttcgaaccctaacagcgat
actctgaccatagcatatgcactgcagtgttttgaactctccggcagcccagtggaattc
tgcaatgacaatgcattgcacctgaaaaccatggaggaaatgtccaatctacgaaggcag
ctacttcaactgatctttgaaaaaggcctttgtggcactgagcaggatttctcttggatt
catggaactcaagatgaagtagaacgtgcttggagagtttcctccaataatccccctctt
ttgctgaatgaagaagagctcttgggccaagctatctgtgctggatgggtagatagggtt
gccaaacgcattagaggagcttcaagactgtcagaaggagacacaaaaacacatgcagta
cggtatcaagcttgtatggtaaaagaaactgtgttcctccatcgttggtcatctgtttct
agttcggcccctgagttcttggtttacagtgaattgctacagacaaaacgaccatacatg
tatggtgtgacaagtgtgaaaccagagtggcttgttaaatatgctagctctttgtgtacc
ttctcctcagtccttacagatcccaaaccttattatgagcctcaatctgaccaagtattc
tgttatgtcattcctacttttgggcctcatttatgggaacttcccctacatagtttgcca
atcacaaatgatatgcaacgagtgacagttttcgcttatgctttgcttgaaggaaaagtg
ttaccatgcttagggtctgttcgtaagtttatgtcagcccctcctagtagcattttgagg
ccacaggcatcaggtcaaaaaagggtcggaaatcttttgaacaagttaaagaccaaatta
atagatagctgctctatgttaagagaggtctggatggagaaccctaacgagttgcattca
gaaattctgggctggtttcaagagagtttccacaagcactttcaagttctttggtcaaaa
atgcatggtgaaattcttttagaacctcaagaacgcttccccaaaagaggaagagttaaa
agcaaaagcaagaagtga
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