Juglans regia (English walnut): 108994354
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Entry
108994354 CDS
T05245
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
jre
Juglans regia (English walnut)
Pathway
jre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108994354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108994354
03036 Chromosome and associated proteins [BR:
jre03036
]
108994354
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108994354
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108994354
PBAF complex
108994354
GBAF(ncBAF) complex
108994354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
108994354
NCBI-ProteinID:
XP_018825056
UniProt:
A0A2I4F077
A0A833UBV1
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Position
9:14375109..14378583
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AA seq
547 aa
AA seq
DB search
MNHNNTKKNVGASIPFGNSGTVPQSMPMNQNHQTHLLSQSQPQTQSGSHFPGHFQLSEPQ
TQAIALAQAQAHAQAQAQAAHVQFQAQLQAQVQSVPQLHPGNTSNVGVPSPSVSTPGTGS
AKRSSQKPPSRPPGSSNANTGSPYKTMELTPAVRRKKQKLPEKQIPDKVATLLPESALYT
QMLELEARVDAALARKKIDIQESLKNPSRVQKTLRIYVFNTFTYQTQTGPENKDAEPPSW
SLKIIGRILEDGKDPVVAGVVQKPSTSYPKFSSFFKKITIYLDQSLYPGNHVILWESARS
PVLNEGFEVKKKGDKEFTAIIRLEMNYVPEKFKLSPALSEVLGIEVETRPRIVAAIWHYV
KVRKLQNPNDPSFFFCDPPLQKVFGEEKIKFATVTQKISQHLTPPPPIHLEHKIKLSGNC
PAGTTCYDVLVDVPFQLEKEMNAFLENTERHKEIDACDELICASIKKIHESRRRRAFFLG
FSLSPAEFINALIASQSKDLKLAAGDASRNAEKERHSDFYNQPWVEDAVIRYLNRKSAGT
DAAGTLK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaatcataataacaccaagaagaatgttggggcgtcaatcccttttggtaattctggg
acggttccacagtctatgcccatgaaccagaaccaccaaacccatcttctatctcagtca
caacctcaaacacaaagtgggtctcacttcccaggccacttccagctgtctgagcctcaa
actcaggcaattgcactggcgcaggctcaggctcatgcccaggcacaagctcaggctgcc
catgtccaattccaagctcagttacaagctcaagtccagtcagttccccagttgcatcct
ggaaatactagtaatgtaggtgtcccgtcaccttctgtttcgacgcctggtactgggagt
gccaagaggagttctcaaaagccaccttctcggcctcctggttcatccaatgccaacaca
gggtcaccgtacaagaccatggagctgacccctgctgttcgtagaaagaagcagaagcta
cccgagaagcaaataccggataaagtagctacacttctgccagagtctgctctttacact
caaatgctcgaactggaggctcgtgttgatgctgctttggcaagaaagaagattgacatt
caggagtcacttaaaaacccttcccgtgttcagaaaacacttaggatttatgttttcaac
accttcacatatcagacacaaacaggtcctgagaacaaggatgcagagcctccttcttgg
tcacttaagatcatagggaggatattggaagatggaaaggatcctgtggtggctggagtg
gtgcagaaaccaagcacttcgtacccaaagttttcatcttttttcaagaaaattaccata
tacttggatcagagcctctatccaggtaaccatgtaattctatgggagagtgcccgttcg
cctgttcttaatgagggatttgaggtgaagaaaaaaggggataaggaatttaccgcaata
ataagactggaaatgaactacgtgcctgagaagtttaaactttcccctgctctgagtgaa
gttcttggaattgaggtagagactcgcccaagaattgttgctgcaatttggcactatgtg
aaggttaggaagttacagaacccaaatgatccttccttctttttttgtgatccacctctt
cagaaagtgtttggggaagagaagattaaatttgccacggttacacagaagatatcacag
catttgacgcccccaccacccatacatttggagcataaaatcaagctttcaggaaattgt
cctgctggaactacttgctatgatgtactggttgatgtgccttttcaattagagaaggaa
atgaatgcattcttggaaaataccgaacgccacaaagagattgatgcctgtgacgaattg
atttgtgcttctataaagaagatccacgagagtcgtcggaggcgggctttctttcttgga
tttagtctttctccggccgaatttattaacgctttaattgcttctcagagcaaggattta
aagcttgctgctggagatgctagccgtaatgctgaaaaagagcgccattctgatttctat
aatcaaccatgggttgaagatgctgtcattcgttacctgaaccgcaagtctgctggaacg
gatgctgctggaacacttaagtga
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