Entry |
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Name |
(RefSeq) uncharacterized protein LOC108994911
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KO |
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Organism |
jre Juglans regia (English walnut)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:jre00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108994911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:jre03021]
108994911
03019 Messenger RNA biogenesis [BR:jre03019]
108994911
Transcription machinery [BR:jre03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108994911
Messenger RNA biogenesis [BR:jre03019]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
108994911
U7-dependent histone pre-mRNA processing factors
108994911
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
3:32669517..32694111
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AA seq |
1339 aa
MVAMMMATNKREKLASLINSAKSASDIPSKLESLRQLKQNLLHEDPSLLSEFLSPLLDLQ
SDRFSPVRKLVAEMIGEIGLKHMEFLPEIVPALITVVDDGTPAVARQAITSGIDLFRSTL
ERVAIQGLYSSELSSSVESSWAWMLKFKDKIYSMAFQLGSGGTRLLALKFVEAVILLYTP
DPNGLSEPPTNEGESVQFNISWLRAGHPVLNVGNLSIEATHSLGLLLDQLRFPAVRSLSN
SAIIVLINSLSAIAKQRPAFYGRILPVLLGLEPSSSVINGMHVSAAHHALKGAFLTCLKC
THPGAAPWRDSLVDALREMKAGGLAEQTLHQFSKITGSLGEGKEDFPVIKEEKVTCIAGD
AVDSNLGRKRSGAPGNSDPAEDRDMPEKRMKASPSVSEESTRELDKSITIPQDGIPSTRP
TTSRGDVDTGPAQQLVAMFGALVAQGEKAIGSLEILISSISADLLAEVVMANMRYLPPNL
SKAEGDDLLMNMTIVGSDTDAKYPPSFIADVLSLSSTFPPIVSLLDAHQSMSNEIVKPHS
KEEHAASVADSVVAHSDMDHDSDDAILPAGVSASSDIVLSEMEKGCFPITSDIHDMGNLE
SEIPGLDSSALTDGLSETQVASSLASTDLEDASQEQVTSLVQTTLNLHPSMSTDRSEELS
PKAAVTDVSSLVSSTETSVGLSFHVILPKMSAPVVYLDDEQKDHLQKLAFIRIVEAYKQV
AVAGGAQVRFSLLAYLGFEFPLELDPWKLLQKHILEDYMGHEGHELTLRVLYRLYGEQVE
DRDFFSYTAAASEYEKFLLTVAETLRDSFPPSDKSLSRLFDEAPDLPKSVLKLLESMCSP
GNFDKAEELQSGDRVTQGLSVVWRLIIQRPPIRDVCLKIALQSAVHHLEEVRMKAIRLVA
NKLFPLSSNAKQIESFAKEMLFSVIGDDVADGIDTEGSVREAQKDSEIEKPVDERLSVSA
NSKDISSDTHQSSMCHSVSSLSVSEAQRCMSLYFALCTKKHSLFREIFVVYKSMPKTVKQ
AIHRQIPVLVRTMGSSSDLLEIISDPPSGSKNLLMQVLQILTDGTIPSSELLFTIRKLYD
SKVKDLEIVIPILPFLPKDEVKLIFPHVVNLPPEKFQSALARILKGLSHSGPVLTPAEVL
IAIHGIDPEKDGIPLKKVTDACNACFEQRQVFTQQVLAKVLNQLVEQIPLPLLFMRTVLQ
AIGAFPALVDFIMEILSRLVSKEIWKYPKLWVGFLKCAFLTKPQSFGVLLKLPPAQLENA
LARTAALKAPLITHASQPNIRSSLPRSVLAVLGIVPDSETSSQAQTGVAPDSQNSSQVQT
SQADSGHMSNSDKVVTEKS |
NT seq |
4020 nt +upstreamnt +downstreamnt
atggtggcaatgatgatggccacgaacaagagggagaagctcgcgagtctgataaattcg
gccaagtccgcttccgatataccgtccaaacttgaatccttgcgtcaattaaagcagaat
ttgctccatgaagacccttccttgctctccgagttcctctctcccctcctcgacctccag
tccgatcggttcagtccggttcgcaagctcgttgcagagatgataggtgaaatcggctta
aagcacatggaattcctacctgaaattgtacctgcgctgattactgttgtggacgatggt
acaccagctgttgctcgacaagccatcactagcgggattgatttatttcgttcaactctt
gaaagagttgcaattcagggtctctattcaagtgaattgagcagttcagttgagtcatca
tgggcatggatgttaaaattcaaggacaaaatatattccatggcttttcagctgggaagt
ggtggaacaaggttgctggcactgaagtttgttgaagctgtcattcttctttatacacct
gatcctaatggcttgtcagagcctcctactaatgaaggagagtctgtgcaatttaatata
tcttggcttcgtgcgggtcatccagtgcttaatgttggaaatttgtcaattgaagccact
catagtttgggtctattgcttgatcagcttaggtttccagcagtcagatctcttagtaac
tctgcaataattgtgctcattaatagtctctcagcaatcgcaaaacaaaggcctgcattc
tatggacggattctgccagttttacttggtttggagccctcaagctctgtaatcaatgga
atgcatgtttctgcggcacatcatgctttaaaaggcgccttcctcacctgcttgaaatgt
actcacccgggtgctgcaccgtggcgagatagtttggtggatgccttgagagagatgaaa
gctggagggttggcagagcaaactcttcaccaattttctaagattactggaagtctaggt
gaaggaaaagaagatttcccagttattaaggaagagaaggttacatgtatagcaggtgat
gctgtggatagtaatttgggaagaaaaagatctggagcaccaggaaacagtgatccggct
gaagatagagatatgcctgaaaagcgtatgaaagcatcgcctagtgtctcagaggaatct
actagagagttggataaaagtatcacaattcctcaagatggaattccatcaactcggcca
accacttccagaggagatgttgatactggacctgcgcagcaacttgttgctatgtttggt
gccttggttgctcaaggcgaaaaagccattggctctttagagattcttatatcaagtatc
tctgctgacttgctagcggaggtagtgatggctaatatgcgttaccttcctcccaatctt
tccaaagctgaaggagatgatttgctgatgaacatgactatagttgggagtgatactgat
gctaaatatcctccatcatttatagcagacgttctgtcactttctagtactttcccaccg
atagtctcactgttagatgctcaccagtctatgtccaatgaaatagtgaaacctcatagc
aaggaagaacatgctgcttctgtagctgatagtgttgttgcacattctgacatggaccat
gattctgacgatgcaattttgcctgctggtgtatcagcttcttctgatattgttttgtct
gaaatggagaaaggttgttttccaattacatctgatatccatgacatggggaatctagag
agtgagatacctggcttggattcttctgctcttactgatggattgtcagagacacaggtt
gcttcctccttggcctccactgatctggaagatgccagtcaagagcaagttacaagtttg
gttcagacaacactgaatttacatccatcaatgtcaacagacaggtccgaggaacttagc
ccaaaggcagctgttacagatgtcagcagtctggtctcatcaacagaaacttctgttggg
ttgtcttttcatgtcatcttgcccaagatgtcagcacctgttgtttaccttgatgatgaa
cagaaggatcatttgcagaaattggcttttatacgcattgttgaggcatataagcaagta
gcagttgctggaggtgcacaagtccgcttttcactgcttgcatatttagggtttgagttt
cccttggagctagacccttggaaactgttacaaaagcatatactggaagattacatgggt
catgagggacatgagttgaccttgcgtgtcctctacaggttatatggcgagcaagtagag
gaccgtgacttcttttcttacacagctgcggcttctgaatatgaaaaattccttcttact
gtggcagagacacttagagattcttttccaccttcagataaatcactaagtagattgttt
gatgaagctcctgatctgccgaagtcagttttaaaattactagaaagcatgtgttctcct
ggaaactttgataaagctgaggagttacagagtggggatcgtgttactcaaggtctcagt
gttgtgtggagattgattatacagaggccacccattcgagatgtctgcttgaaaattgcc
ttacagagtgcagtccatcacttggaggaagtgcgtatgaaggcaatacgtctggtggca
aacaagctttttcctttatcatcgaatgccaaacagattgaaagttttgcaaaagaaatg
ttgttctctgtaataggtgatgatgtggcagatggaattgatactgaaggatcagtcaga
gaagcacagaaggattctgagattgaaaagcctgtggatgaacgtctgtcagtgagtgcc
aacagtaaggatatttcctctgatactcatcaatcgagcatgtgtcacagtgtttcctcc
ctttcagtctcagaggcacagcgttgcatgtctctgtattttgccttgtgtactaagaag
cactcccttttccgcgaaatatttgtagtctataagagcatgccaaagacggttaagcag
gccattcaccgccagattccagtactagtccgtactatgggctcatcatcagatctactt
gaaataatttcggatcctccaagtggaagcaagaaccttctaatgcaggttttgcaaata
ctgacagatgggacgattccctcctcagaattattgtttacaataagaaagttatatgat
tcaaaagtaaaggatttagagattgttatcccgatcttgccattccttccaaaggatgag
gttaagctgatttttccccatgttgtgaatcttccaccagaaaagttccagtcagcactt
gcccgcatactaaagggattgtctcattcgggtccagtgctcactccagctgaagtgcta
attgctatccatgggattgaccccgaaaaagatggaattcccttgaagaaggtcacagac
gcttgcaatgcatgttttgagcagaggcaagtattcacccaacaagtgcttgcaaaagtt
ttgaatcaattggttgagcagatccctcttcctttattgttcatgcgaaccgtattacaa
gccataggtgctttcccagcactggtggattttataatggagattctgtctcgtcttgtg
agcaaggagatttggaaatacccaaagttgtgggtaggattcttgaagtgtgctttcttg
acaaagcctcagtcatttggtgtgttgcttaagctacctccagcacagctagaaaacgca
ttggctagaactgcagcactgaaagcaccattgatcactcatgctagccaaccaaatatc
cgttcttcccttccaagatctgttttggcggttcttggaattgtaccagattctgagact
tcaagtcaagcacaaactggagttgcccctgattctcagaattctagtcaggtgcaaaca
agtcaggctgacagtggacatatgagtaactcggataaggtggtgacagagaaatcttga |