KEGG   Juglans regia (English walnut): 108995344
Entry
108995344         CDS       T05245                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108995344
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    108995344
Spliceosome [BR:jre03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108995344
 Complex B
    108995344
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 108995344
NCBI-ProteinID: XP_018826439
UniProt: A0A2I4F475 A0A833XCG2
LinkDB
Position
7:3721348..3728416
AA seq 578 aa
MSDYEVRYNGEDADNYGGGSSPPQPRGGSNGGPDDNSDSKSQHGSRDYEREPSKSRERDR
EKGRDKERDRDRDRERDRGSDKERSKERDRNRERDRDRDRHHRDRHGDRDRSERRERGRD
RDDDDYHRSRDHDRRRDQDRDIEDRRRRRSRSRSGGRSEQKSRSRSRSRSKSKRISGFDM
APPASALLPGATAAVAAAGQLPGTNPAIPGLFPNIFPLATGQQFGALPVMPVQAMTQQAT
RHARRVYVGGLPPTANEQSVATYFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS
VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTAGSAGGL
EGPDRIFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI
ACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIALQKLILQPGSVATKVVC
LTQVVSPDELKDDDDYQDILEDMREECGKFGALVNLVIPRPKPNGEPSPGVGKVFLEYAD
TDGSSKARSGLNGRKFGGNQVMAVFYPENKFAQGDYEG
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgtctgattacgaagtaagatacaacggggaggacgctgacaattatggcggtggctcc
tcacctcctcaacctcgcggtggtagcaatggcggtcctgacgataacagcgactccaag
tctcagcatggttctcgtgattatgaaagagaaccttctaaaagtagggagagggacaga
gaaaaggggcgcgataaggagagggatagggatagagatcgggagagagacagaggcagt
gataaggagagaagcaaggaaagagacaggaatagggaaagggacagagacagggaccgt
catcatagagatcgccatggggatcgagatcgcagtgagagaagggaacggggcagggat
agagatgatgatgattaccatcgaagtcgggatcatgacagacgaagggatcaggacaga
gatatagaggataggcgcaggcgcaggtctcgatctcgttcagggggtagatctgagcaa
aaatcgaggtcacgttctcgctctcgctcaaagagcaaaaggattagtggttttgatatg
gctcctcctgcttctgcattgttgcctggtgccactgccgcagttgctgcagcaggtcag
cttcctgggactaatccagccattcctgggttgtttccaaacatatttcctttagcaact
ggtcagcagtttggagctcttccagttatgccggttcaggcaatgacccaacaggcaaca
aggcatgctcgacgggtgtatgtgggtggccttcctcctacagcaaatgaacagtctgtt
gcaacatatttcagtcatgttatggctgcaattggaggaaacactgctggtccaggagat
gctgttgtcaatgtttacataaaccatgaaaagaagtttgctttcgtggagatgagatct
gtcgaggaggctagtaatgcaatggctttagatgggattatttttgagggtgcccctgtt
aaggtgaggagacctagtgattacaacccatcccttgctgcaacacttggtccaagccag
cccaatcctaatctgaacctggctgctgttgggttaacagcgggatctgcaggtgggctt
gaggggcctgaccgcatttttgtggggggacttccctattactttacagagacccagatc
agggagttgttagagacttttgggccacttcggggttttgatcttgtgaaagacagagaa
actggaaattcaaaaggctatgccttttgtgtttaccaagatctttcagttacagacata
gcttgtgcagctctgaatggaattaaaatgggtgataaaactcttacagttagacgtgct
aaccagggtgctagccaacctaaacccgagcaagagaatgtattattgcacgcgcagcag
cagattgcattgcagaagctcatcttacaacctggctcggtggccacaaaggttgtttgt
cttactcaggtggtttctcctgatgaacttaaagatgatgatgattatcaagacattttg
gaagacatgagagaagagtgcggaaaatttggtgcactggtaaatcttgtcatcccccgc
ccaaaaccaaatggcgaaccatcacctggagttggaaaggtctttctagagtatgcagac
actgatggttcgtcaaaagcacgttctgggttgaatggaagaaaatttggtgggaatcaa
gtcatggcagtcttttatccagagaacaagtttgcccagggggattacgaaggatag

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