Juglans regia (English walnut): 108995999
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Entry
108995999 CDS
T05245
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108995999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108995999
04121 Ubiquitin system [BR:
jre04121
]
108995999
03036 Chromosome and associated proteins [BR:
jre03036
]
108995999
03400 DNA repair and recombination proteins [BR:
jre03400
]
108995999
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
108995999
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108995999
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108995999
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
108995999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-RING_6
zf-RING_5
zf-RING_10
zf-C3HC4_3
zf-RING_2
PHD_NSD
PTCB-BRCT
Prok-RING_4
RTT107_BRCT_5
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108995999
NCBI-ProteinID:
XP_018827254
UniProt:
A0A2I4F6H2
LinkDB
All DBs
Position
1:43528315..43535441
Genome browser
AA seq
735 aa
AA seq
DB search
MGDSIDNGGSRFLNPWFLHFQKLGLELKCPLCLNLLAKPMLLSCNHIFCNSCIPSSTQLK
SECPVCKAHYFNKDLRPVPFMDNLVTIYRGLEATFCANLFQRVPADSRKVLEQFQASLYA
GNCSKEPSDIVQRDESCSGRLIFPLLATKQDQIPLNLNNSVENGFGMNDKFEKYSTPIEG
KGGREGVKFNDALNTNPLPLSSQMEPESLGEQKVLEIEMNQVSQSLPDTPPSFGDTKGSD
DESFYRGSVNSPENSLINRASNKHSDGRTRQLRHDSSASETEDGYLRDIKRQKKLTYEPS
GLRIERHDCIPPVSHSEILMIPNSELELESRVPPVAAQQPLVLDASYISNSICAFCQSPA
ISKNTGPILHYANGKMVVGDEASLSNVIHVHRLCVDWAPQVYFVNETVKNLKAEVARGSK
IKCSKCGRKGAALGCYDKSCRKSYHVPCAVEMPDCRWDHENFLMLCPAHTSIKFPNEKSQ
SGKHVFKDNLVPNQRVPPQPILWVAPRDGAKEWVICGSALSTEEKVLVLKFASMCGATVT
KYWKPNVTHVIAATDAQGACTRTLKVLMAILNGRWILKIGWVKACMEAMHPVDEEPYEID
LDNHGSCNGPKNGRLMGLDNAPKLFNGLKFYFVGDFVPGYKEDLQNLVTTAGGTVLKSKE
EVVTQRCDDQVVLSRIRVVYNLDSPQGCKVGEEVDILWKRLTEAQDVAADIGCQVIGHTW
LLESIAACKLQPLVN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgggggattctattgataatggcggcagtagatttctgaacccttggtttcttcatttt
cagaaactgggtctcgagctcaaatgccctctctgcttaaacttgcttgccaaaccaatg
ttactctcctgcaatcacattttctgcaattcctgcatacccagctcaacacagcttaaa
tcagagtgccctgtctgtaaagctcactattttaacaaagacttaaggcctgtgcctttc
atggataatctagtaacgatatataggggtttggaggctactttctgtgccaatctgttt
cagcgtgtgcctgcagattccaggaaggttttggagcaattccaggcttccctttatgct
ggtaattgtagtaaggaaccatctgacattgtccagcgggatgaatcatgcagtggacgg
ttaatctttccattattggctaccaagcaagatcaaattccattgaatttgaataattct
gttgaaaatgggtttggtatgaatgacaaatttgagaagtacagtactcccatagaaggt
aaaggtggtagggaaggagtcaaatttaacgatgcattgaatacgaatccactaccattg
agttcacaaatggagcctgagagccttggagagcaaaaggttttggaaatagaaatgaat
caggtgtctcagtcattaccagatacccctccttcgtttggtgatactaagggctcagat
gatgaaagcttttatcggggcagtgtgaatagtccagaaaactctttgatcaatagagca
tccaacaaacattctgacggcaggactaggcagttgaggcatgacagttctgcgtctgaa
accgaagatggttatttgagggatatcaagagacaaaagaaattaacctatgaaccatca
gggttgaggattgaaagacatgattgtattccaccagtctcacattctgagatccttatg
atacctaattctgaattggaacttgaatctagggtgcctcctgttgctgcacagcagcct
ttagttttggatgcctcatatataagtaatagcatttgtgcattttgccagtcccctgca
atctccaagaatactggcccaattttgcattatgctaatgggaaaatggtagtaggagat
gaggcaagcctttcaaatgtcatacatgtccacaggctgtgtgttgattgggcaccgcag
gtgtattttgttaatgaaactgttaagaatctgaaggcagaagtggcaagaggttcaaag
atcaagtgcagcaaatgtggacgaaagggagcagccctgggctgctatgataaatcctgt
cggaaaagctatcatgttccctgtgcagtggaaatgccagattgtcgctgggatcatgag
aactttctcatgctctgtcctgctcatacttcaatcaaatttccaaatgagaaatctcaa
tctggaaaacatgtttttaaggataatctggtgccaaatcagagagtccctccgcagcct
atactttgggtagctcctagggatggagccaaagaatgggttatatgtggatctgctcta
tctactgaagagaaggttcttgtgctcaagtttgcaagcatgtgtggtgcaactgtcacc
aagtattggaaaccaaatgtcacacacgtgattgcggccacagatgcacagggtgcatgt
accaggacgcttaaagttctcatggccattttgaatgggagatggatccttaaaattggc
tgggtaaaggcttgtatggaagcaatgcaccccgtggatgaagaaccttatgaaattgac
ctggacaaccatgggagttgcaatggccccaaaaatggcaggcttatgggcttggataat
gcaccaaagctctttaatgggttgaagttctattttgttggtgattttgtgcctggatac
aaggaagatctgcaaaacttggttacaactgcaggaggtactgttttgaaaagtaaagaa
gaagtggtgacacaaagatgtgatgatcaggtagttctgtcaaggatacgagttgtttac
aaccttgattccccacaaggatgcaaggtaggagaagaagttgatattctttggaagagg
ttgactgaggcacaggatgtggcggctgacataggatgccaagtcatcggtcacacttgg
cttttggaatcaattgctgcatgcaagttgcagcctcttgtcaactga
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