Juglans regia (English walnut): 108996103
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Entry
108996103 CDS
T05245
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00900
Terpenoid backbone biosynthesis
jre01100
Metabolic pathways
jre01110
Biosynthesis of secondary metabolites
Module
jre_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108996103
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
jre01006
]
108996103
Enzymes [BR:
jre01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108996103
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
108996103
2.5.1.29 geranylgeranyl diphosphate synthase
108996103
Prenyltransferases [BR:
jre01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108996103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
108996103
NCBI-ProteinID:
XP_018827423
UniProt:
A0A2I4F707
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All DBs
Position
1:complement(10897699..10898822)
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AA seq
320 aa
AA seq
DB search
MSCASVHIRTLTTLKEEGQESKPTFNFEAYMIQKAKSINQALDAAVPLKEGQKIQEAMRY
SLLAGGKRVRPVLCTAACELVGGSESMSMSAACAVEMIHTMSLIHDDLPCMDNDELRRGR
PTNHKAFGEAVAVLAGDGLLALAFEHIAVSTAGVPLTRVVRAIGELARSIGPEGLVAGQV
ADMSCEGLPVSEVGLEQLEFIHLHKTAALLEGSVVVGAILGGGSNEEVEKLRRFARCIGL
LFQVVDDILDVTKSSEELGKTAGKDLVAGKATYPKLMGIEKSREFAEKLNKEAQSWLSGF
DPEKAKPLLALANYIALRQN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgcgagtgtgcatatacgtaccctcaccactctcaaagaggaaggacaagaa
tcaaaacccactttcaacttcgaagcctacatgatccagaaagccaaatccatcaaccaa
gctctagacgccgccgttccactgaaagagggccagaagatccaggaggccatgcgctac
tcccttctggccggtggcaagcgagttcgcccggtcctatgcactgccgcctgtgagctc
gttggcgggtctgagtccatgtccatgtccgctgcatgtgctgtcgagatgatacacacc
atgtctctgatccacgacgatcttccttgcatggacaatgatgagctccgccgaggaagg
ccaacgaaccataaggccttcggcgaagctgttgcggttcttgccggagatgggcttctg
gccttggcgttcgagcacatagcagtttccaccgcgggcgtgccgctgacaagagtcgtc
cgcgcaattggcgagttagccaggtcgatagggccggaagggcttgttgctgggcaggta
gcagatatgagttgcgaagggctccctgtctctgaagtggggttagaacagctcgaattc
attcatctgcacaagacagcagcattgctggaaggttcagtcgttgtgggagcgattctg
ggaggcgggtcgaacgaggaggtagagaagttgaggaggttcgcaaggtgtattgggttg
ctattccaggtggtcgacgacattcttgacgtgacaaagtcgtcggaggaactggggaag
acggccggaaaggacttggtagctggaaaggctacgtatccaaagctaatgggaatcgag
aagtcgagggagtttgccgaaaaactgaacaaggaagctcagagctggctatctgggttt
gatccggagaaggccaaacccttgcttgctctggccaattacattgctcttaggcaaaac
tag
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