Juglans regia (English walnut): 108996271
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Entry
108996271 CDS
T05245
Name
(RefSeq) protein CHROMATIN REMODELING 4-like isoform X1
Organism
jre
Juglans regia (English walnut)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HDA2-3
ResIII
PHD
DUF1087
DEAD
Motif
Other DBs
NCBI-GeneID:
108996271
NCBI-ProteinID:
XP_018827600
UniProt:
A0A2I4F7H9
LinkDB
All DBs
Position
3:complement(7171970..7209256)
Genome browser
AA seq
2354 aa
AA seq
DB search
MKENSSSTSKMINRNWVLKRKRRKLPCGTVLANSKEDGLLVSESPKNTSLVKRELKSEIK
SERYSSKKKGNDGYYFECVVCDLGGNLLCCDSCPQTYHLQCLNPPLKRIPMGKWQCPKCC
QKSDPLKPISQPDTISKRARTKMVTGKSKSGMQSSDINKVSRIFGSSIIAKKRSSSKGKS
VRLLEQKPVSSRIDVSYSTKPSHQSLALLDGGSSCVNVDDEDKSNISPMDSPADGKSTSP
AKEISSHSKVTNPETTDEDPEGKLDLSGNIKSPEKTLVLAISAATMEHRKRKQKVDDNNS
QKKRRTDKGKFKVSTSKKRGSKASNASPGTSKSHQKRKSVNDGVSTALSKEGLGTKILDV
RRKDEKLPQEATKLSHELNKADNVNRAVISGESILTEPLQVDRVLGCRVRGDYIGSSHHL
SVSVADDLHSDVLLISENQNRVSEENSVCDTDLDVAAGKNLTDGCQNIVVSLDKEGSVKT
EMKVDKMHVYRRSATRECKKGQNMRFLQEDVKDSDSSAADKDQDEVITEDLEKPNEKMVI
EKNTSANLRDPDNDEVPKIWETHVSNETKDEKQADLEMEIKIYGENKIQEATQAETACVD
QDTVLYEFLIKWVGKSHIHNSWISESELKVLAKRKLENYKAKYGIAVINICEEHWKQPQR
VIALRNFKDGRREAFVKWTGLPYDECTWETLDEPALQKCLHLIDLFNQFECQTLEKDSSK
DASPRGKGDCQQNEIVTLPEQPKELKGGSLFPHQLEALNWLRKCWHKSKNVILADEMGLG
KTVSAGAFISSLYFEFKATLPCLVLVPLSTMPNWLAEFSLWAPNLNVVEYHGCAKARAII
RQYEWYACDPSDLNKKTAAYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSGS
KLFSMLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEERFNDLTTAEKV
EELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNVGKG
VPQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHAMLKILYKE
GHRVLIFSQMTKLLDILEDYLTIEFGSKTYERVDGSVSVADRQSAIARFNQDKSRFVFLL
STRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERI
LQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSYSMYGKDTVELNNNKDEAVID
TDNKHRKRAGSLGDVYQDKCTESSSRIMWDENAILKLLDRSNLQSGSTDNAEGDLETDML
GSVKALEWNDEPTEEQGGAESPPIVTDEIFAQSSERKEDNAVAGMEENEWDRLLRVRWEK
YQVEEEAALGRGKRLRKAVSYREAYAPHPSETLTESCGDEERELEPEPEREYTPAGRALK
SKFAKLRARQKERLAQRNAGLESCLGGGMPEPDSVPNYPSINSKEGDVTELHQAVSEKIS
VIDLEDDKFIQPVDGPKCKNDIPLRLGRMSKYTMSSHLDFPVNPLGHPSPDIFLPSHHFQ
STSYTNSVPTSNLLPVLGLCAPNVNQVEPSYRNLLRANGRQSKLGPGPEFPFSLASCFRT
SIETDGKNQDSSLDKAKKPDATAEVLQQGLKNSIPDNCPPYLPCPPAVQGKASERLESCG
STFSDFQEKMALPNLPFDEKMLSRFSLSAKTAPTSHLDYLPSLSLGSRPEAVNGFMQEFP
TIPLLPNLKFPAQDAVRYNQKDREMPPTLDLGQMPATFSSFPEKHKKVLESIMMRTGSGS
SNMFRKKSKKESWSEDELDFLWIGVRRHGRGNWESMIRDPRLKFSKYKTSEDLSARWEEE
QLKLFDGSVFPVPKSTKPTKPTKSSLFPGISDGMMARALRGSRLTTPPKFKAHLTDMKLG
FGDLMPSVPHFETSDRLGLQNDQFVSMPTWNHEKYWANHPGEASAGPCEGPGTSSNVPID
KPFLLNSYGTSCLGSLGLNCSTSFDVQIKEDERCANKYGKFPNLLDRSLNVLRDSHHDLG
VGESVSSVLLPDSNKRLNLSHLKGEEAAGCSSSKDKLPHWLREAVSAPTKPPDPDLPPTV
SAIAHSVRLLYGEDKPTIPPFVIPAPPPSIPKDPRRTLKKKKKRSSHLSRWVPPDIAERS
QEFQRNLHGDNAGSSSISLAPTFSLHPESTMGTTGLPQIESDLNLRPLNLNMMNPSSSLA
HLHTQKKISMGLSPSPEVLQLVATCVAPVPHMSSISGMTNSSFIDSKLEVSKSVDLVGFS
DPQDEFEERKAEQSSPFNVWSSNPGNPGEKLQDLPESGDSSKTQSDPLRTERPDGEDISS
EGTVSDHPVSDHES
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaacagttcatcaactagtaaaatgattaacagaaactgggtcttgaagcgc
aaacggagaaagctgccttgtggaacagttctagccaacagtaaagaagatggtttgttg
gtatcagaatccccaaagaatacttctttggttaaacgtgagctgaagagtgaaattaaa
tctgagcgatattcatccaagaagaaagggaatgatgggtattactttgaatgcgttgtc
tgcgatcttggcggcaacttgttgtgttgtgatagttgtccccagacctatcatctccag
tgcctcaatccacctctcaagcgcataccaatgggaaagtggcaatgtccaaagtgctgt
cagaaaagtgatcctttaaagcccataagccaacctgataccatttcaaaacgggcaaga
acaaaaatggtcactggaaaatcaaaaagtggaatgcaatcatctgacattaacaaagta
tcccggatttttggaagctccattattgcgaagaaaagatcctccagcaaaggaaaatct
gtcagactccttgaacagaaacctgtctcttcccgaatagatgtatcctatagcaccaag
ccaagtcatcaatcccttgctttgctagatggtggttcatcatgtgtgaatgttgatgat
gaggataaatctaatatatctcctatggactctcctgcagacgggaagtcaacctctcct
gctaaggaaatttcatctcattctaaagttacaaatccagaaacaactgatgaagatcct
gaggggaagcttgatttgtctggtaacattaaatctcctgaaaaaacacttgttcttgca
ataagtgctgctaccatggaacatagaaaaagaaaacagaaagtcgatgataataacagc
caaaagaagcgtaggaccgataagggaaaatttaaagttagcacatctaagaaacgtgga
tccaaagcaagtaatgcaagccctggaactagtaaatcacatcagaagcgcaagtctgtt
aacgatggggtttccactgctttgtcaaaggaaggccttggaacaaagatcttagatgtg
cggaggaaagatgagaaacttcctcaggaagcaactaaactgtctcatgaattaaacaag
gcagataatgtgaacagagcagtaatttctggagaaagcatcctcactgaacctttgcag
gttgatcgagttcttgggtgtcgagttcgaggtgattatattggttcttcacatcactta
tctgtgtctgttgctgatgacctacattctgatgtcttactaatttcagaaaaccaaaac
agagtatcggaagaaaattctgtttgtgatactgatttagatgtagcagctgggaaaaat
cttactgacggttgtcagaatattgttgtgagtcttgataaggaaggaagtgtgaagact
gaaatgaaagtggataaaatgcatgtatacagaagatctgcaaccagagaatgtaaaaaa
gggcaaaacatgagatttttacaggaggatgtcaaggattcagattctagtgctgcagat
aaagatcaagatgaagtaattacagaagatctggaaaaaccaaatgaaaagatggttata
gagaagaatacatcagctaatttgagagatcctgacaatgatgaagttccaaaaatttgg
gaaacacatgtatctaatgaaaccaaagatgaaaaacaagctgatttagagatggaaata
aaaatttatggagagaacaaaattcaggaggccacacaggctgaaactgcatgcgttgat
caagatacggtattgtatgagtttttaattaagtgggtagggaagtctcatattcacaat
agttggatttctgaatctgagctcaaagttttggcaaagagaaaattagaaaattacaag
gcaaaatatgggatagctgtaataaacatctgcgaggaacactggaagcagccccagcgg
gtgattgctctccgtaatttcaaagatggtaggcgtgaagcttttgtaaaatggacaggc
ctcccttatgacgaatgcacttgggaaacattggatgagcctgctcttcaaaaatgtttg
cacctgattgatctgtttaaccaattcgaatgccaaacattggagaaagattcttctaag
gatgcttcaccgagaggaaagggtgattgtcaacaaaatgagatagttactctcccagag
caacctaaggaactaaaaggaggttcattgtttccccatcaacttgaagcgctcaattgg
ttgcgtaaatgctggcataaatccaagaatgtgatacttgctgatgaaatggggcttgga
aaaacagtatctgcgggtgcttttatttcatctctgtattttgagttcaaagctactctg
ccttgtttagtgttggtcccgctttcgacaatgcctaactggcttgctgaattttcattg
tgggcccccaacttgaatgttgtggagtatcatggatgtgcaaaagcaagagccataatt
cgccaatatgagtggtatgcttgtgatccaagtgacttgaataagaaaacagctgcctat
aaatttaatgttcttttaactacatatgagatggttcttgctgattcctctcatttgcgt
ggagttccttgggaagttcttgtggttgatgaaggccaccgtctgaagaattctggaagt
aagctttttagcatgctcaatacgttctcgtttcaacatcgtgtactgttgactggtaca
cctcttcaaaacaatatcggtgagatgtataacttgcttaacttcttgcagccagcttca
tttccttctctctcttcatttgaagagaggtttaatgatcttacaactgcggaaaaagtg
gaagaattgaagaaacttgttgctccacatatgcttcgaaggcttaaaaaggatgcaatg
caaaatattccccctaagactgaacggatggttcctgttgagttgtcatccattcaagca
gaatactatcgtgcgatgctgacaaagaactatcagatattgcggaatgttgggaaaggg
gttccccagcaatcaatgctaaatattgtgatgcagttgagaaaagtttgcaatcaccca
tatctcattcctggtactgaacctgattctggttcagtagaattccttcatgaaatgcgg
ataaaagcctcagccaagttgactttgttgcatgctatgcttaagattctatacaaggaa
ggacatcgagtccttattttctcacagatgaccaaacttcttgatatcctcgaagattat
cttactatagaatttgggtctaaaacatatgagagagtggatggctctgtctcagtggct
gatcgtcaatcagcaattgcacgctttaaccaagataaaagtcgattcgtcttcttgttg
tcaacacgctcttgtggccttgggatcaatttggcaactgccgacaccgtcattatctat
gattctgatttcaatccgcatgctgatattcaagctatgaatcgtgcacatcgaattgga
cagtcaaagagacttttggtatatcgacttgtagttcgtgctagcgttgaagagcgcatc
ttgcagcttgcaaagaagaaactgatgcttgatcagctttttgtgaataagtctggatca
caaaaagaagtggaggatattttgaaatggggaacagaagaactttttaatgattcttat
agtatgtatgggaaagatacagtggaacttaataataacaaagatgaggcagtaatagat
acagacaataagcacaggaagagagctggtagtctaggggatgtgtaccaggacaaatgt
acagaaagcagtagcaggatcatgtgggatgaaaatgctattttgaaattgcttgaccgt
tcaaaccttcagtctggatcaactgataatgcggaaggggatttggaaactgatatgctt
ggctcagtgaaggcacttgaatggaatgatgaaccaacagaagaacaagggggagctgaa
tctcctcccattgttactgatgaaatctttgcacaaagttctgaaagaaaagaggataat
gcggttgctggaatggaagaaaatgaatgggatagacttttacgagtgagatgggaaaag
tatcaagtggaggaggaagcagctcttggtcgagggaagcgtctgcgaaaagctgtttct
tatagggaagcatatgctccacacccaagtgaaacattgactgagagttgtggtgatgag
gaacgagagctggaaccagagccagagcgggaatatacaccagcaggacgtgcactaaaa
tcaaaatttgctaaactccgtgctagacaaaaggaacggcttgctcagaggaatgcaggt
ttagaatcttgtcttggtgggggaatgcctgaacctgattctgtccctaactatccttcc
ataaactccaaagaaggggatgtaactgaattacatcaagctgtcagtgagaagatttca
gtaattgacttggaggatgacaaattcattcagccagtagatggtccgaagtgtaagaat
gacatccctttaaggctgggcagaatgtcaaagtacacaatgagtagtcatctggatttt
cctgtcaatccacttggtcatccatctcctgacattttccttcctagtcaccattttcaa
agcacgagctacacaaactcagtgcccaccagcaacttgttaccagttctgggactttgt
gctcccaatgttaatcaagtggagccatcatatcgaaacttgttaagagcaaatggcaga
caaagtaagctgggacctggaccagagtttccattcagtctggcttcttgcttcaggact
tcaattgagacagatgggaaaaatcaggactctagcttggacaaagcaaagaaaccagat
gcgactgctgaagttttgcaacagggtcttaagaacagcatcccggataactgtcctcca
tatcttccatgcccgccagctgtccaaggaaaagcttctgaacgtttagaaagttgtggt
tctactttctctgattttcaagaaaagatggcattgccaaacttgccatttgatgaaaaa
atgctgtccagattctcactttcagcaaagaccgcaccaacttcacatcttgactaccta
cctagtttgtcattaggtagcagaccagaagctgtcaatggcttcatgcaggaattccca
acaataccattgctgcccaacttaaaattcccagcacaagatgcagtgagatataatcag
aaggacagggagatgccacccacattggatcttggacagatgccagccacattttcctca
tttcctgaaaaacataagaaggtgcttgaaagcataatgatgaggactggatctggatca
agcaatatgtttagaaagaaatcgaaaaaagaaagctggtctgaagatgaacttgatttt
ttgtggattggtgttcgtagacatggtcggggaaattgggagtccatgattagagacccg
aggttaaaattttccaaatataaaacatcagaagatttgtcagcaaggtgggaggaggaa
caactcaagctctttgatgggtcagtctttccagttccaaaatcaaccaagccgacaaag
cctactaaatcttcattatttccaggcatttctgatggaatgatggcccgggccttgcga
ggtagtagactcaccacacccccaaagtttaaggcccacctgacagacatgaaattgggt
tttggtgatcttatgcccagcgtgccacattttgaaacatctgatagacttggtttgcaa
aatgaccagtttgtatctatgccaacttggaatcatgagaagtattgggcaaatcatcct
ggggaggcttctgctggaccttgtgaagggccgggaacttcttcaaatgtacccattgac
aagccatttctgctcaattcatatggaaccagttgcttaggttctttaggtctgaattgc
tcgaccagctttgatgtacagataaaagaggatgaacggtgtgctaataagtatgggaag
tttcccaatctcttggatagatcgctaaatgttttgcgtgattcccatcacgatttagga
gttggcgaatctgtcagctcagtattgcttcctgattccaataaaaggctgaatctttca
cacttaaagggtgaagaagcagctggatgtagttcttcaaaggacaagctaccccattgg
ttgcgagaagctgtgagtgcacccacaaaacccccagatcccgacttgccacccactgta
tcagcaattgcacattcagttcgattgctatatggagaagataagccaaccatccctcca
tttgtgatcccagctccgcctccttccataccaaaggatccaagacggactctaaagaag
aaaaagaaacggagctcgcatttgtcgaggtgggtaccgccagacattgctgaaaggagt
caggaattccaaagaaacctccatggtgataatgctggttcaagctcaatctcattggct
ccaacattttcactgcatccagaatcgaccatgggaacaacagggcttccacagattgaa
tctgacctgaacttgcgtcctctaaatttgaatatgatgaacccatcatcctcattagca
catttacacacgcagaagaaaatcagcatgggattgtccccctctcccgaagtgcttcag
ctggtagcaacatgtgttgctcctgtcccacatatgtcatcgatttctggcatgacgaac
tcaagcttcattgatagtaagcttgaggtgtcaaaatctgttgacctagttggattctca
gacccgcaagatgaatttgaagaaaggaaagctgagcagagctcaccttttaatgtatgg
agttcaaatccgggaaatccgggagagaaattacaagaccttcctgaaagtggagattct
agcaaaactcaatcagatccccttcggactgaacggcctgatggtgaggatatatcatct
gagggcactgtctcagatcatcctgtaagtgaccatgaatcatag
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integrated database retrieval system
