Juglans regia (English walnut): 108996311
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Entry
108996311 CDS
T05245
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108996311
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108996311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Stm1_N
HABP4_PAI-RBP1
Motif
Other DBs
NCBI-GeneID:
108996311
NCBI-ProteinID:
XP_018827682
UniProt:
A0A2I4F7R2
A0A834CTH4
LinkDB
All DBs
Position
5:4798025..4801734
Genome browser
AA seq
503 aa
AA seq
DB search
MARVENVFALLGDGDGDDDVSALLERVAAVKAEPPPLEKKKKDKQQQHQKQPVEKEESDW
GLDDAVSMKAKPIVLPDYVTRRDIVVRKNEPEGRERRQGRGSDRSEPGGRGYQRNFGGSD
GYKRNNGGRNGNQRKSDDNGGGSGYHGNNGGENDFQRNVGAESGNAVGDDWQEQGRGRGG
GGRGRGRGRGRGGGRGFNQSKEFGSESQLDVNNYQTEKQGHDGNDNDGWEQNEFQGKVSG
NETKYDVRPRNVNRGRGGDGRGYGGGNRSFGGQEGRFYDRQDGRNNRRGEVSNESESKEN
ITGDIENAVKIDDYSGGAEWDVPVTTEGTTDVVHEQEKLEAQDDSEKKAKDTDENEEDKE
MTLEEYEKVLLEKRKALEALRKTEGRKVTLDKDLESMQLVEKKKDDSLFIKLKSEKEKLK
KKGSLEKDDKVRKSMTINEFLKPAEGELHVAGRGRGGRGRGRGGRGESRGEFLGRRRQVE
AGPAPSFEDPNQFPVLGGAAVAS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagtggaaaacgtctttgctcttttgggggatggagacggagacgacgacgtt
tctgcgctcctcgagcgcgttgctgctgtgaaggcggagcctccgccgctggagaagaag
aagaaagacaagcagcaacagcaccaaaagcagcccgtggagaaggaagagtcagactgg
ggtcttgacgacgccgtgtcgatgaaagcaaagcctattgtgctccccgattacgttaca
agaagagatattgtagttagaaagaatgagccagaggggcgggagcgccgccagggtcgt
ggctctgataggtctgagccaggtgggagaggttatcaacggaattttggaggatctgat
ggctataagcgtaacaacggaggaagaaatggtaatcaacggaaaagtgacgataatgga
gggggaagtggttatcatgggaataatgggggtgagaatgatttccagaggaacgtcgga
gctgaatcaggaaatgcagttggggatgattggcaggagcaggggcgggggcgtggtggt
ggaggtagagggagagggagagggagaggccgtggtggaggcaggggattcaatcagagt
aaggagtttggaagtgaaagccaacttgatgtgaacaattatcagactgagaagcaggga
catgatgggaatgataatgatggttgggaacagaatgagtttcagggaaaagtaagtgga
aatgagactaaatatgatgtgaggccaagaaatgtgaatcggggccgcggcggtgatgga
agaggctatggtgggggaaaccgcagttttggtggacaagaaggccgcttctatgatagg
caagatggaaggaataatagaaggggtgaagtatcaaatgaatctgaatcaaaggaaaac
attactggtgatattgagaatgcagtgaaaattgatgactatagtggtggagctgaatgg
gatgttcctgtgactactgaaggaacaactgatgtggtgcatgaacaggagaagcttgaa
gctcaagatgattctgaaaagaaggccaaagatactgacgagaatgaggaggataaagaa
atgacacttgaagaatatgagaaggtgcttcttgaaaagaggaaggctttggaagcatta
agaaagaccgaggggagaaaggtcacactagataaggatttggagtctatgcaactcgtt
gagaaaaagaaagatgatagccttttcatcaagctgaagtctgagaaggagaagcttaag
aagaaaggtagtcttgaaaaggacgacaaagttcggaagtcgatgaccattaatgaattt
ctgaaaccagctgaaggtgaattacatgttgctggtcgtggtcgtggtggtcgaggtcgt
ggacgtgggggccgaggtgaatctaggggagagtttttgggccggcgacgtcaggtcgag
gctggccctgcacctagctttgaggacccgaaccagtttcctgttctgggaggagctgca
gtagcctcatga
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