Juglans regia (English walnut): 108996605
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Entry
108996605 CDS
T05245
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108996605
Spliceosome [BR:
jre03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108996605
Other components
Complex C specific factors
108996605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF6304
Motif
Other DBs
NCBI-GeneID:
108996605
NCBI-ProteinID:
XP_018828130
UniProt:
A0A2I4F913
A0A833UFL8
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All DBs
Position
13:complement(31961698..31964851)
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AA seq
876 aa
AA seq
DB search
MDDYQEMERFGTENDFDDGQWIGGEFYYRKRKEKRTQTKDDVLYGVFADSASDSDGDYST
KKRRRDPNLYKKADLSKPVNFISTGTVLPTEEIDQNSKKENNEDYENDDDKPGLGLGFDS
ASSGLGLGFNSSSNGVRKNEEYGNGNKGNSGGEDDDDDIFLPSAFGKKIKEGAMRREKER
AEKSKVDKGKRVKDQGFVSGSDVGGFEKHTKGIGMKLLEKMGYRGGGLGKNAQGIVAPIE
AKLRPKNMGMGFNDYKETKKLPPALKELEEKKGSGGVTENVGRVKERQWSKQARKKKEEY
VTAKELLERKAEQGFGEVVQKVYDMRGPQVRVLTNLENLNAEEKAREEDVPMPELQHNLR
LVVDLAELEIEKIDRDLRHEKEAVEMLSKQKEKFVVEAERQKKQLGSMEEILGVLDRLGD
ENSMGKLTLDSLAQCFGDLQRKFPDDYKLCNLSCIACSYALPLFIRVFQGWDPLQSPFHG
LEVVSLWKTLLQGENSHDIWDTGSSPYAQLVSEVVLPAVRISGVNTWQARDPEPMLRFLD
SWEKLLPPSVLQYILDNIVMPKLSSAVGSWEPLRETVPIHIWMHPWLPYLGHKLEGMYQT
IRVKLSQILGAWHPSDVSAYTILSPWRTVFDSVSWEQLMRRFIVPKLQLVLQEFQVNPSI
QKLDEFYWVMNWASDVPIHLMVDMMEKLFFPKWLQVLYHWLQSNPNFEEITKWYLGWKEL
LPKELLANESIRYQLNLGLEMMNQAVEGLEVVQPGLKENISYFRVLEQRQFEAQQKAAAQ
QAAASLSGVTNMDGMGGAVDMSLKEVIEAHAQQHGLLFKPKPGRMHNGHQIYGFGNVSII
MDSLNQKVYSQTDEAWSLVSLQDLLDKHNSFLTKRR
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggatgattaccaggagatggagaggttcgggacggagaacgacttcgacgacgggcaa
tggatcggcggcgagttctactacaggaagcgcaaggagaagcgcactcagaccaaagac
gacgtactctacggcgtcttcgctgactccgcctccgattccgatggcgattactccacc
aaaaagcgccgtagagatcccaatctctacaagaaggccgacctctccaagcccgtcaat
ttcatttccaccgggaccgtattgcccacagaggaaatcgatcagaattccaagaaagaa
aacaacgaagattatgagaacgacgacgacaaacctgggttggggctcgggttcgattcc
gctagctctgggctgggtctagggttcaattcgagttctaacggggttcgtaagaatgaa
gagtacggtaatggtaacaagggtaatagtggaggtgaagatgatgatgacgacattttt
ttgccatcagcgtttgggaagaagattaaggaaggggctatgaggagggagaaggagaga
gcggagaagtcgaaagtggataagggtaagagagtgaaagatcaagggtttgtaagtggg
agcgatgttggtgggtttgagaagcacacaaaggggattgggatgaagttgttggagaaa
atggggtacaggggcggtgggcttgggaagaatgcgcaagggattgtggccccaattgag
gcgaagttgcggcctaagaatatgggcatggggttcaacgattataaggagacgaagaag
ttgccgccggcgttgaaggagctcgaggagaagaagggttcggggggtgtgactgagaat
gtggggagagtgaaggagaggcagtggtcgaagcaggccaggaagaagaaggaggagtat
gtgactgccaaagagttgttggaaaggaaggcggagcaggggttcggtgaagtggttcag
aaggtttatgatatgaggggtccgcaggtccgggtgcttactaatttggagaatttgaat
gcagaggagaaggcgagggaggaagacgtgccgatgccggagcttcagcacaatttgagg
ttagttgtggacttagcggagctcgaaattgagaagattgacagggacttgaggcacgag
aaggaggcggtggagatgctgagcaagcagaaggagaagtttgttgttgaggccgagagg
cagaagaagcagttgggtagtatggaggagatattgggcgttttggaccgtttaggagat
gagaattcgatgggaaagttgacgttggactcgcttgcgcagtgtttcggggatttacag
agaaaatttcctgatgattataagttatgtaacttgtcctgcattgcatgctcatatgct
ttgcctttgtttattagagtgtttcagggatgggaccctcttcagagtccctttcacggg
ttggaggttgtgtctttgtggaagactttgcttcagggtgaaaattctcacgatatctgg
gatactggttcgtcgccttatgcccaattggtatctgaagttgtgttaccggctgtgaga
atttctggcgtcaatacttggcaggccagagacccggaaccgatgctacggtttttggat
tcctgggaaaagttgttacctccttcagttctccaatatatcttggataacattgtgatg
ccgaaattgagtagtgctgtgggctcttgggaaccactgcgggaaactgttccgatccac
atttggatgcatccatggttaccgtatttgggacacaaattggagggtatgtatcagacg
atacgtgtcaagttgagtcaaattcttggtgcttggcacccgagtgatgtgtctgcgtat
actatattgtcaccttggaggactgtgtttgattcagttagttgggagcagcttatgcgt
agatttatagttccaaagttgcagcttgttcttcaggaattccaagtaaacccgtcaatt
cagaagcttgatgaattttattgggttatgaactgggcttctgatgtaccaattcatctt
atggttgatatgatggagaagttattttttcccaagtggctacaggtcttatatcactgg
ttacagtcgaacccaaactttgaggagattacaaaatggtacctgggctggaaggaactt
cttccaaaggagctgctggccaatgaaagtatccggtatcagcttaaccttggtcttgag
atgatgaaccaggctgtagaaggtttggaggtggtccaacctggtctgaaagagaatatc
agctactttagggtacttgagcagaggcaatttgaggctcagcagaaagcagcggcacag
caagcagctgcaagcctcagtggtgttacaaatatggatggtatgggtggtgccgttgac
atgagcttgaaagaagttattgaggcgcatgcccaacagcatggattactatttaagcct
aaacctggcaggatgcacaatggtcaccagatatatggtttcggtaatgtaagcattata
atggactctttgaatcaaaaggtgtattcccaaaccgatgaagcttggtcccttgtatcc
cttcaagatttgctggacaagcacaatagttttcttacaaagagacgctga
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