Juglans regia (English walnut): 108996814
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Entry
108996814 CDS
T05245
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
jre
Juglans regia (English walnut)
Pathway
jre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108996814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108996814
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108996814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
108996814
NCBI-ProteinID:
XP_018828379
UniProt:
A0A2I4F9Q4
A0A833XRD6
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Position
3:complement(9697571..9702508)
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AA seq
472 aa
AA seq
DB search
MDMEPGKLFIGGISWDTNEDRLREYFQSFGVVVEAEIMKDRATGRARGFGFVVFADPVVA
ERVVMEKHVIDGRTVEAKKAVPRDDQNILSRNNGSMHGSPGPAHTKKIFVGGLASTVTES
NFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLYKTFHELNGKLVEVKR
AVPKELSPGPSRGQMGGYNYGLSRVRSLLNGYAQGYNPSSVGGYGHRVDGRFSPVTAGRI
GSPSFSPGYGTGLNIEPGLSLSYGGNANLSSNLGFGRVLNHLYSGNSNRNVNPVGYGVGN
GGNSSVLSSVSRNLLGNGSLNYATNSANSTALLGLRNGSSGIDSFGKIGTLWSSSPNSGQ
GGGAGTTYSSDYLSYGSGEVNFGSGGMGYGRNSGTGVSPVSSNAASNGGYSGSYGLFYGD
PTWQSSPPEPEGSGSFGYGLGNAASDVLSKNSDDYVSLYSVTNRQSYKGIAV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggatatggagcctggaaagcttttcattggtgggatatcttgggacacaaatgaagac
cgtcttagagagtatttccagtcttttggagtagtagttgaagctgagataatgaaggat
cgagccacaggtcgtgcccgtggtttcggttttgttgtttttgcagaccctgttgttgca
gaaagagttgttatggaaaagcatgtgatagatggcagaactgttgaagcaaaaaaagct
gttcctagagatgatcagaacattctgagcagaaacaatggcagcatgcatgggtctcct
ggtcctgcccatacaaagaagatatttgtaggaggattagcatccacagtcacagagagc
aattttaagaagtacttcgatcaatttggtacaataacagatgtggtggtgatgtatgac
cataatacgcaaaggccaagaggatttgggttcattacatatgattcagaggaagcagtg
gagaaagtattgtacaaaacctttcatgaactcaatggcaaactggttgaagttaaaaga
gctgtccccaaagaactatctccagggccaagtcggggtcaaatgggtggatataactat
ggtctgagtagagttagaagcttacttaatggctacgctcaaggatacaatccaagctca
gtcggaggctatggacatagagtggatggtagatttagtccagttacagctggtcgtatt
ggatctccttcattcagtcctggatatgggacaggattgaatattgagcccggattgagt
ctaagctatgggggaaatgcaaaccttagttctaaccttggttttggacgggttttgaac
catttatatagtggaaattcgaataggaatgtcaaccctgttggatatggtgtgggaaat
ggggggaatagttcagtcttaagttcggtaagccgtaatctgttggggaatgggagtctt
aattatgctactaactctgcaaactccactgctctgctgggcctcagaaatggaagttca
ggaatagattcttttggcaagattggaacactttggagttcctctcctaactcaggtcaa
gggggaggtgctggtaccacctacagtagtgactatcttagttatggcagtggagaagtc
aactttggttcaggagggatgggttatggaagaaacagtggaactggcgtttcaccggtg
tcatcaaatgctgcatcaaatggtggttacagtggatcctatggtttgttttatggggac
ccaacttggcaatcttcacctccagaaccggaggggtctgggtcatttggttatgggctt
ggaaatgcagcttctgatgttttaagtaaaaactctgatgattatgtgagtctttatagt
gttaccaatagacaatcatacaaaggaattgctgtgtag
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