Juglans regia (English walnut): 108996856
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Entry
108996856 CDS
T05245
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
108996856
Enzymes [BR:
jre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
108996856
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108996856
Prokaryotic type
108996856
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
108996856
NCBI-ProteinID:
XP_018828438
UniProt:
A0A2I4F9X1
A0A833TXQ3
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Position
14:6035704..6040116
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AA seq
517 aa
AA seq
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MAVSSLRFPLCPFLIKNPNPSFRLFGIPTSPFRPYCSSSSSSSSSYSASPSSAHTWESIH
KKKVVLRVGYVGTDYRGLQMQRDEHSLSTIEEELETAIFKAGGIRDSNFGNLHKIAWARS
SRTDKGVHSLATTISLKMEIPENAWKEDPCGMALANHINYYLPKNIKVFSILPSQRRFDP
RRECNLRKYSYLLPAEIIGIKSYFSTTEVDHHLLDLNNILNAFEGEHPFHNYTVRSKYRK
RFPTKQSHGNGSVPRRAKASGEAASAIDGSDGEDDFQSDGAIALDVERMSKNSLESSVSH
ELLADTCNKHENDLKSHTTNLVVHARWLHEPDEMDRIGASHFRKIFHCSCGKLEKSLGFP
YVELSIWGESFMLHQIRKMVGTAVAVKRNLLPRDILTLSLSKFSRIILPLAPSEVLILRG
NSFSLSKRPGDAMRPEMLAIVESEEILKAVDDFYTSIMFPEVSNLLDPLGSPWKEWVEKL
DEHTSIPDAELDEVRKAWKLWKEKFRSNATVASVINQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctcttcgcttcgtttcccgctctgtccattcctcattaaaaacccaaaccca
agcttcagacttttcggaatcccaacatcacccttcagaccatactgctcttcttcgtct
tcgtcttcgtcttcctattccgcgtctccatcctccgcccacacatgggaatctatccac
aaaaagaaggtagtcttgcgggttgggtatgttgggaccgattacagaggtctgcaaatg
cagcgagatgaacactcattatccactattgaagaagaattggagacggccatttttaag
gccggtgggattcgtgatagtaattttgggaatctccacaaaattgcatgggcgagaagt
agccgtacggataaaggagttcactcgttggcaacaacaatatccttgaaaatggaaatc
cctgaaaatgcatggaaagaagacccttgtggcatggctcttgcaaatcacataaactat
tatcttcccaaaaatattaaagtctttagcattttaccctcacagaggagatttgatcct
aggagggaatgtaatctccggaagtattcttatcttcttcctgctgaaatcattggaatt
aaaagttactttagcacaactgaagttgatcatcatctgttggacttaaacaatatattg
aatgcttttgagggagaacatcccttccacaattatacagtacggtccaagtacagaaaa
cggtttcctactaaacaatcacatggaaatggcagtgttcccagaagagcaaaagcatct
ggtgaggcagcctctgcgatcgacggaagtgatggagaggatgattttcagagtgatgga
gcgattgcattagatgttgagaggatgagcaaaaactctttagaatccagtgtttcccat
gaacttctagctgacacttgcaataagcacgaaaatgatctgaagtcccacaccaccaat
ttagttgtccatgcaagatggctacatgaacctgatgagatggacaggataggtgcttcc
cactttagaaagatctttcactgttcttgtggaaagctggagaaatcacttggatttcct
tatgtcgagctttctatatggggagaatcattcatgttacatcaaatccgcaaaatggtt
gggactgctgtggctgtaaagcgcaacttacttcctagagatattctaactttgtcgctt
tccaagttctcacggatcattctaccccttgccccatccgaagtgttgattttgagagga
aatagtttttctctgagcaaaagaccgggagatgcaatgaggcctgaaatgctagcgata
gttgaatcagaagaaattttgaaggcagttgatgatttctacacctctataatgtttcct
gaagtttccaacttactggatcctttgggttctccttggaaagaatgggttgaaaaattg
gacgagcatacaagcatccctgatgcagaattggatgaagtcaggaaagcttggaaattg
tggaaggaaaagtttcggagtaatgccacagttgcatcagtcataaaccaatga
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