Juglans regia (English walnut): 108996942
Help
Entry
108996942 CDS
T05245
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
jre01009
]
108996942
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
108996942
Protein phosphatases and associated proteins [BR:
jre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108996942
Membrane trafficking [BR:
jre04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
108996942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
108996942
NCBI-ProteinID:
XP_018828534
UniProt:
A0A2I4FA56
LinkDB
All DBs
Position
3:complement(17029865..17066694)
Genome browser
AA seq
1021 aa
AA seq
DB search
MDSQPSQSGRSPPSEESPNLASNVVSSSLTKSNSDASSQSLSSILNNPHVGKSDWWWSSS
SSTNVAPPEFAPLISSSDVSRSDFQSYLALISESYHRFEDILNHASKENVDLENIGGQGE
ALVACLREVPALYFKEDFALEDGATFRAACPFSNVTENLVLQEKLSHYLDVVELHLVKEI
SLRSNSFFEAQGQLQDLNVKIVEGCSRILELKETIRLLDVDLVDSARQIQDLNATRSNLL
ALQQKLRLILYVNQALSALKLLVTSADCAGALDITDDLQHLLDGDELTGLHCFRHLRDNV
AASIESINSILSAEFMRASIHDAGDSDVLILSQVKARASIPTNGKDDDQVKLDEEETTNF
QDRLLPIIIGLLRTAKLPSVLRIYRDTLTADMKIAIKTAVAELLPILLLRPLESDFTTGE
RTADSDGGGASLASKLRSLSSESFVQLLSAIFKIVRTHLVRAAEVKKAIEWIMSNIDGHY
AADSVAAAIALGAATAETSQDSEGQRGSLLPFSPQRAAKVPSFQGKSNEAISPSNMSRNF
RADVLRENTEAVFAACDAAHGRWAKLLGVRALLHPKLRLQEFLSIYNITQEFITATEKIG
GRLGYSIRGTLQSQAKAFVEFQHESRMAKIKAVLDQETWVEVDVPDEFQAIVASFFGSEE
LISENPHHAENNVETSSSEVIINNDGSLITDTGPLKSQQKIDQTKISGISIENSEEMKSI
PLAQGIGKNKADTTTYSAHNNNSKMEHGKSASHTLMYKGVGYHMVNCGLILLKILSEYTD
MNNYLPALSSEIVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVIGFT
YATIPDIRRILFLKVPETRKALLVSEIDRVAQDFKVHRDEIHTKLVQIMRERLLVHLRGL
PQIVESWNRPEDSDPQPSQFARALTKEVGFLQRVLSRTLHEVDVQVIFRQVVIIFHSQIS
EAFSRLDIHSPQAKNRLHLDVKHILGCIRSLPSDDLSNSGTPNWGKLDEFLVERFGSEAG
Q
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcagccttcccaatcgggaaggtccccgccatctgaagaatctcccaacctt
gccagtaacgtcgtctcctcctccttgacgaaatcgaattcagatgctagtagccagagc
ttgtcatccatcctcaacaaccctcacgtgggcaaatcagattggtggtggtcctcctcc
tcctccaccaacgtagcccctcccgagttcgcgcccttaatctcctcatccgacgtttca
cgatctgatttccagagctatttggctttgatttcggagtcatatcaccgattcgaggac
atcctaaaccacgcgagcaaagagaatgtggatttggagaacatcggcggccaaggcgaa
gcgctcgtcgcgtgcctgcgagaagttccggctctgtacttcaaggaggatttcgcgttg
gaggacggggccacgttccgcgcggcgtgtccgttttcaaacgtgacggagaacttggtg
ctgcaggagaagctgtcgcactacctggacgtggtggagttgcacctagtgaaggagatc
tctctgcggtccaattccttctttgaggcgcaggggcagctgcaggacttgaatgtgaag
atcgtggaaggttgtagtcggattttggagttgaaggagacgataaggctcttggatgtg
gatttggtggattccgccagacagattcaggacttgaatgccacgaggagcaacttgttg
gctcttcagcagaaattaaggcttatattatacgtcaaccaggctctgtcggctcttaaa
ttgcttgttacatctgcagattgtgctggagctttggacatcactgatgatttgcagcat
ttgctggatggggatgagcttacaggtttacactgctttcgtcacctacgagataatgta
gcagcttcaatagagtccataaacagcattctttcagcagaatttatgcgcgcttcaata
catgatgctggagattcagacgttctaattttgtcccaagtgaaagcaagggcttccatt
ccgacaaatggaaaagatgatgatcaggttaagttggatgaagaagagaccactaatttt
caggatcgtcttcttcccatcataattggattgctcagaactgcaaagctcccttctgtg
ttgaggatctaccgagacacgcttactgctgatatgaaaattgctattaagactgcagtt
gcagagctgcttcccatcctcctcctccggccattggagtcagatttcaccactggagaa
cgaacagctgattctgatggtggaggtgcatcacttgcaagcaagttgaggagcctatca
tctgaaagctttgttcaacttttgagtgctattttcaagattgtacggacacatttagtg
cgggctgctgaagtgaaaaaggccattgagtggatcatgtccaacattgatggtcactat
gctgctgattcagttgctgctgcaattgcgcttggtgctgcaactgcagaaacatcacaa
gacagtgagggtcagcgtggttcgcttttaccattttcacctcagagagctgctaaggtt
ccttcatttcagggaaaatcaaatgaggccataagtccctcaaatatgtcgagaaatttc
agggctgatgtattgcgggagaacacagaagctgtttttgcagcttgtgatgctgctcat
ggaagatgggcaaagctcctaggtgtccgtgctcttcttcatcctaagttgagattacag
gagtttttaagcatatacaacatcacccaggagtttataaccgctacagagaagattggt
ggaaggttgggatatagcatacgtggaacactgcagtctcaggccaaagcctttgtcgaa
ttccagcatgaatctcgcatggcaaaaattaaggcagtgcttgaccaagaaacatgggtg
gaagtcgatgttcctgatgaatttcaggccattgtcgcttcattttttggttctgaagaa
ttgatttctgagaacccccatcatgctgaaaataatgtggaaacaagctctagtgaagtg
atcataaacaatgatggttcactcattacagatactggaccactgaaatctcaacagaaa
attgatcagactaagattagtggaatatctattgagaattcggaagagatgaaatctatt
cctttggctcagggcattggaaaaaataaagctgataccacaacttattcggctcataat
aacaatagtaaaatggagcatggaaaatctgcctctcatactcttatgtataaaggtgtt
ggttatcacatggtaaactgcggcttaatattgctgaagatattgtcggagtatactgat
atgaacaactatttgccagcactatcttcagaaattgttcatcgtgttgtcgaaatttta
aaatttttcaatacaagaacatgtcagcttgttcttggtgctggtgccatgcaggtgtct
ggtctgaagtctatcacttctaaacacttggccttggcaagtcaagtaattggttttaca
tatgctactatccccgatatcaggaggattctttttctgaaagtaccagagacacggaaa
gcattgttggtatcagagattgaccgagttgctcaggatttcaaagttcaccgagatgaa
atacatacaaaacttgttcagataatgagagaaaggttattggttcatctgcgtggcttg
cctcaaattgtcgagagctggaatagacctgaagattcagacccacagcccagtcaattt
gcccgtgcccttaccaaggaagttggatttcttcaacgtgttttatctcggactttacac
gaggtagatgttcaagtaattttcaggcaagtggtcattatctttcattcacaaatttca
gaagcattttcacgcttagatatccacagtccacaagcaaagaatagactgcatctagat
gttaaacacattcttgggtgtattcggtcattgccttccgatgatttgagcaattctggt
actccaaactgggggaaacttgatgaatttttggtggaaagatttgggtccgaagctggc
caatag
DBGET
integrated database retrieval system
