Juglans regia (English walnut): 108996973
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Entry
108996973 CDS
T05245
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like
KO
K09264
MADS-box transcription factor, plant
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jre03000
]
108996973
Transcription factors [BR:
jre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
108996973
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
DUF1192
FliD_C
Motif
Other DBs
NCBI-GeneID:
108996973
NCBI-ProteinID:
XP_018828587
UniProt:
A0A2I4FAB2
A0A833TU87
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Position
15:complement(10558832..10562964)
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AA seq
248 aa
AA seq
DB search
MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKVFQYSTD
SCMERILERYERYSYHAERQLIAHDLEQNGSWTLEHAKLKARMEILQRNQKHLMGEDLDS
LSLKELQNLEQQLDSALKHIRSRKNQVMHESISALQKKDKALKEQNNVLAKKVKEKEKEL
LAEQAQWDQQNQSLHTSSILPQPLLPLDNIGTGSYQAIRGSQREDDASPSRNRANTVLLP
PWMLRHLD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggggaggggaagggttcagttgaagaggatcgagaacaagatcaacaggcaggtcact
ttctcaaagagaaggtctggcttgctgaagaaagcccacgagatctctgtgctttgtgat
gctgaggtggctctgattgttttctctaccaaagggaaggtctttcagtattctactgat
tcttgtatggaaaggattcttgaaaggtatgagagatattcatatcatgcagagaggcaa
cttattgcacatgatctcgaacaaaatggaagctggactctggagcatgcgaagctcaag
gctaggatggagattttacaaagaaatcaaaagcatttaatgggagaagatctcgactcc
ttgagtcttaaagagcttcaaaatttggagcaacagcttgattctgctctcaaacacata
aggtcgagaaagaaccaagttatgcacgaatccatttcggcgcttcagaaaaaggataag
gcattgaaggagcaaaacaacgtgcttgccaagaaggtgaaggagaaagaaaaggaatta
cttgccgaacaggcacaatgggatcagcagaatcaatcacttcacacatcctctatcctt
ccacaaccgttgctgcccttggacaatattgggactgggtcctaccaagcaattagaggc
agccaaagagaagatgacgcaagtccatctcgaaatcgagccaatacagtactcctgccc
ccttggatgcttcgccatcttgattaa
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