Juglans regia (English walnut): 108997268
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Entry
108997268 CDS
T05245
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
108997268
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108997268
microRNA pathway
RISC loading complex
108997268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Helicase_C
Dicer_dimer
DEAD
ResIII
PAZ
Cas3-like_C_2
SNF2-rel_dom
dsrm
SWI2_SNF2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
108997268
NCBI-ProteinID:
XP_018829004
UniProt:
A0A2I4FBH1
A0A833X0M6
LinkDB
All DBs
Position
11:complement(18675212..18689505)
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AA seq
1403 aa
AA seq
DB search
MESVTVLGAGSQHPSADPLSFARSYQLEALEISIKQNTIVFLETGSGKTLIAIMLLRSYA
YLLRKPSPFIAVFLVPQVVLVSQQGEAVKMHTDLNVGMYYGEMGVDFWDAAIWKKHIEKH
EVLVMTPAILLAGLRHSFFKLSMIKVLIIDECHHAKGKHPYACIMTEFYHRQLRSEISKL
PRIFGMTASPIKTKSGVSEFCFWEKIKELETLMNSKVYTCASESVLAQFIPFSTPKFKVY
RHKEIPCSLYAHLTIELQSLKEKHELSLKKSDLVGSTKDSMSKNISKVFSALIFCLDELG
VWLALKAAQSFSCFDSDLCTEADSIPWGKLDVFGETIVKHFSLDAFHAFSTYIPSGPDWS
IGNDVKANMDAGLLTSKVVCLIESLLEYRYLKDIRCIVFVERIVTAIVLHSLLEELLPKY
CSWKSKYIAGNNSRLQSQTRKKQNEIVQEFRKGMVNVIVATSILEEGLDVQSCNLVIRFD
PSATVCSFIQSRGRARMKHSDYILMVKSEDCATQSRLEKYLASGDIMRNASLRHASLPCS
PLQIDLNDEKFYCVESTGATVTLSSSVSLIFFYCSRLPSDCYFKPAPRWDQKTCTLYLPK
SCPLQKVVLRGNINAKILKQTACLEACKQLHEIGALTDNLVPDIVVEEADAQESGNEPYI
DEQPCYFSPELVGRWPKDSDIMTYHCYLIELKQSFVYDIPVRDIVLVMKNELGSEVGSMH
FDLDTDRGSLTVNFKYVGVINFRPDQVLLCRRFQITLLRVLIDRNLNKLKECLDGEFLGD
ETDYLLLPATGKHQRPLIIDWLCVTSVLFSCENFCEYHLNCYLPMGCARSVQTKDGPVCI
CLLQNSLVCTPHNGNVYCITEILGLNANSCLTLRDGRIMTYKKYFEEWHGIKLRFDHESL
VNGIHIFQVQNYLQRCREQKEKGSSKRSVELPPELCSIVMSPIPVSIFYSFSFVPSILHR
LESLLIAVNLKRMLLDHCMQNDVIPVSKVLEAITTKNCQEIFHLESLETLGDSFLKYAVS
QQLFKTYKNQHEGVLSVKKEKLISNAALCKFGCDRKLPGFIRNKSFDPKKWIIPGDRSVS
YALSEELLFNTRKIYIKETRKVKSKLVADVVEALIGALVSTGGETAALFFMDWLGIKVDF
HITPYERHFQVHAEKLLNVRQLENLVNYSFHGHSLLVEALTHGSYMLPEIPRCYQRLEFL
GDSVLDYIITKHFYFKYPGLSPALLTDMRSASVNNDCYARSAVKCGLHKHILHASQELHK
HIVETVYNFEKLSSESTFGWESETSFPKVLGDVIESLAGAILVDSRYDMEVVFCSIRPLL
EPLVTPETVKPNPSRELNELCQKEHYIMNKPIKSRNNGLISITIEVEAKGHLFKGTATDK
DKTIAKKVACKKVLESMKRFGLT
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgttactgtcttaggagctggatcccagcatccatctgctgatcctctctca
tttgcaagaagttatcagcttgaagcgctggagatatcaatcaagcagaacactatagtg
ttcttggagactggctccggcaagactcttattgccatcatgcttctgcgcagctatgcc
tatcttctccgcaagccttcacctttcattgcagtcttcttagttccccaagttgtattg
gtctctcaacaaggtgaggccgtgaaaatgcacactgacctgaatgtgggcatgtattat
ggagaaatgggagttgacttttgggatgctgctatatggaagaaacacatagaaaaacat
gaggtgctagtaatgacacctgcaattttgcttgctggcttgagacatagctttttcaaa
ttaagcatgattaaggttttaataattgatgaatgtcaccatgccaagggtaagcaccct
tatgcttgcattatgacggagttctatcaccgtcagctaaggtctgaaatatccaaactt
cctagaatatttggaatgactgcttctcccataaaaacaaaaagtggagtgtcagaattc
tgtttttgggaaaagattaaggaacttgagaccctgatgaattcaaaggtttatacctgt
gctagtgaatctgtgcttgctcagtttataccgttttcaactccgaagtttaaggtttat
aggcacaaggaaatcccttgtagcttatatgctcatttaactattgaattgcagagtttg
aaagaaaagcacgaactctctctgaagaagtctgatcttgtaggatctactaaagattct
atgagcaaaaatatatcaaaggttttttcagctttgatattctgtttggatgagcttggt
gtttggctggctctaaaggctgcacagtccttttcatgctttgattctgacttgtgcact
gaagctgactcaattccatggggtaaactggatgtgtttggtgagacaattgttaaacat
ttcagtttggatgctttccatgcattttcaacttacattccatcaggtccagactggtct
atcggtaatgatgttaaagctaatatggacgcagggcttctaacttcaaaagttgtctgt
ctcattgaatcgcttcttgaatacagatatctaaaggatatcagatgtatagtctttgtg
gaaaggattgttacagccattgtattacattctcttttggaggagttgcttccaaaatac
tgcagctggaagtctaaatacattgcagggaacaactctcggttgcaatcacagacaagg
aaaaaacaaaatgaaattgtgcaggaatttcgtaaaggcatggtgaacgtcattgttgca
acatcaattcttgaagagggtttagatgttcaaagctgcaacttggttattagatttgac
ccttctgccactgtttgtagtttcatacagtccaggggccgtgctagaatgaaacattca
gattacattttaatggttaagagtgaggattgtgctactcaatctcgactggagaaatat
cttgctagtggagatatcatgagaaatgcatcattacgtcatgcttcgcttccttgctca
cctcttcaaatcgatttaaatgatgagaaattttattgtgttgaaagcactggagcgact
gtgactctttcttctagtgtcagtttgatattcttctattgttcacggctcccttctgat
tgctattttaaaccagctcccaggtgggatcagaagacttgcactttatatcttcccaag
agctgtcctttacaaaaagttgttttacgaggaaacatcaatgctaaaattctgaagcaa
actgcctgcctcgaagcatgcaagcaacttcatgagattggtgctttgactgataatctt
gttccagatattgttgtggaagaagctgatgctcaagaaagtgggaatgaaccttatatt
gatgagcaaccctgttacttctcacctgaactggtcggtcgctggccaaaggattctgat
ataatgacgtatcattgctacttgattgagttgaagcagagctttgtgtatgacattcca
gttcgtgatattgtccttgtcatgaaaaatgagctaggatctgaggttggaagcatgcat
tttgacttggacactgacaggggtagtttgacggtgaactttaaatatgtaggagttatt
aattttagaccagatcaagtccttttgtgtagaaggtttcagataactcttttaagagtt
cttatagatcgcaatttgaacaagttaaaagaatgtttggatggagagtttttgggagat
gagactgattatcttttgctcccagccactggcaaacatcagagacctctgatcattgat
tggctatgtgttacttctgtgctcttttcatgtgaaaatttttgtgaatatcacttaaat
tgttatttgcccatgggttgtgctcgtagtgtgcaaaccaaagatggtcctgtatgcatt
tgcctgcttcagaattctttggtctgcaccccacacaatggtaatgtgtattgcataact
gagattttgggattgaatgcaaactcatgtctgacgcttcgggatggcagaatcatgacc
tacaagaagtactttgaagaatggcatggcatcaagctgcgatttgatcatgaatcattg
gttaatgggatacacatttttcaggtgcaaaattaccttcaaagatgcagagagcagaaa
gagaaaggatcgagtaagcggtcggttgaattgcctccggaactttgttctatagttatg
tcgccgatacctgtctctatattttattcgttctcatttgttccctcaatcttgcaccgg
cttgagtctttgcttatagctgtcaacttaaaaaggatgcttttggatcattgcatgcaa
aatgatgtcattccagtctccaaggtgctggaagcaattactacaaagaattgccaagag
atattccacttggagtccttggaaacacttggagattcttttctcaaatatgctgtcagt
caacagcttttcaagacctataaaaatcagcacgagggtgtcctcagtgtcaagaaagaa
aaattaatttcgaatgcagctctctgcaagtttggatgtgaccgcaaacttccagggttt
attcgtaacaagtccttcgatccaaaaaagtggatcattcctggtgatagatctgtgagt
tatgcattaagtgaggagttgctttttaatacaagaaaaatatatattaaggaaactagg
aaggtgaagagtaaacttgtcgctgatgttgttgaggcactaattggtgcattagttagc
acaggtggtgaaacggcagccttattttttatggattggttgggtataaaggtggatttt
cacattacaccatacgagaggcacttccaagttcacgctgagaagcttctaaatgttaga
cagttggagaacctagtgaactactcatttcatggtcactctttgttagtggaagcattg
acccatggttcttacatgcttcctgagattccaagatgctatcagcgacttgaatttctt
ggggactccgtgttggattatatcataaccaagcatttctactttaaatatcctgggctg
tcgccagccttactaactgatatgagatctgcttctgtgaataatgattgttatgctcga
tctgcggttaagtgtgggctacataaacacatcctccatgcctcacaagaacttcacaag
catatagttgaaactgtttacaacttcgagaagttatcttctgaatcaacttttggatgg
gagtcagagacaagtttccctaaggtacttggtgatgttatagagtctcttgcaggagcc
attcttgttgattcaagatacgatatggaggtggtcttttgcagtataaggccacttttg
gagcctctggttacacctgaaacagtgaagcccaatccttcacgggagttgaatgagtta
tgccaaaaagagcattacatcatgaataaacccatcaagtcccgcaacaatggtcttatt
tcaattacaatagaggtcgaagctaaaggacatctattcaagggtactgctacagacaaa
gataaaacgattgcaaaaaaagtagcctgtaaaaaagttttggagtccatgaaaagattc
ggtttaacatga
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