Juglans regia (English walnut): 108997538
Help
Entry
108997538 CDS
T05245
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
jre
Juglans regia (English walnut)
Pathway
jre03030
DNA replication
jre03410
Base excision repair
jre03420
Nucleotide excision repair
jre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108997538
03410 Base excision repair
108997538
03420 Nucleotide excision repair
108997538
03430 Mismatch repair
108997538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jre03032
]
108997538
03036 Chromosome and associated proteins [BR:
jre03036
]
108997538
03400 DNA repair and recombination proteins [BR:
jre03400
]
108997538
DNA replication proteins [BR:
jre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108997538
DNA Replication Termination Factors
ELG1-RFC complex
108997538
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108997538
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108997538
Check point factors
HRAD17(Rad24)-RFC complex
108997538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_16
AAA_5
Rad17
TIP49
T2SSE
Motif
Other DBs
NCBI-GeneID:
108997538
NCBI-ProteinID:
XP_018829397
UniProt:
A0A2I4FCM0
LinkDB
All DBs
Position
12:2872461..2877804
Genome browser
AA seq
665 aa
AA seq
DB search
MGFQYKRNISPMSRPERDSHVSPYKPRLDERKLDRNDFAGSTRKQNHRTLSRDGNGAHPV
QLLEVDRVVGEKTNYRRRSATAPRLRKNDYGNMLQREESAPSPLPNMVRKHKEAVNHVKT
PSVGELNEMIAKAKLSVGLQDNAPVLESIESISPGDIFFSRDHTALALQKNVLPKNNGSE
RHFAPKPRMISSGDAAAHQRFKVNDTFDLNPGNTPSRTGFSQTTISSSSAMSGKNSGKLS
NKSSKMSDTSGRTTESMRKFTANRRKSQSSPWLACMRKGPCRTSKSPEHRPFDETMFIDK
AFVVENLRQFWADKHQPGSLNGFTCHKQEAQLLKQIVSHDVCPHILLKGPTGSGKRALTM
ALLREIYGDDCWNISHDLRCFQIQERRPMQVVVPLTFSTHHVELNVNLEANAKYALIGLV
KEISSQYAVPPEVSNVNFRPEYKVIVLYEVDKAEQSTQHLMKWIMDCYTESCKLILCCED
DADILESVKTRCKVMKVDALVTHEIMEVLMQIARKEDFDLPTTFATKIATKSKQNLRKAI
MALEACKAHNYPFDDDQPVPIGWEEVLDELAADILADPSPTRLSYIREKFQKLLLDFVHP
KLILQKLVEQFLKRVETSSKRQLYYWHAYYNKKLPAGTSAILKLEEFVAKFISIYRKSSS
NRQYI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggttttcaatataaaagaaatattagtcccatgtcaagaccagagcgcgacagccat
gtttctccctataaaccaaggttagatgaacgcaaactggataggaatgattttgcaggg
tcgactagaaagcaaaatcacagaactctgagtagagacggaaatggagctcatccagta
cagcttcttgaagttgatagagtggtaggtgagaaaacaaactacaggcgtagatcagcg
actgctccaagactgaggaaaaacgattatggtaatatgctgcagagagaagagagtgcc
ccctcgccattgccaaacatggttcgtaaacataaggaagctgtgaatcatgtaaaaaca
ccttcagtaggtgaactcaatgaaatgattgccaaggcaaagctttctgttggtcttcaa
gataatgcacctgtacttgagagcattgaatccatttcaccaggtgatatcttcttttcc
agggatcacacagcactggcgctgcagaagaatgttctgcccaaaaataatggttctgag
aggcatttcgccccgaagcctagaatgatttcctcaggagatgctgctgctcaccaacga
tttaaagtaaatgatacttttgatcttaaccccgggaatactccatcccgaactggtttt
tcgcaaacaactatttcctctagctctgctatgagtgggaaaaatagcggtaaacttagc
aacaagagtagtaagatgagtgatactagtggaagaaccactgagagcatgagaaaattc
acagccaataggaggaagagtcaatcaagtccatggttggcttgcatgagaaagggccct
tgcagaacatcaaaatcacctgaacatcgaccatttgatgaaactatgtttattgacaag
gcatttgtggttgaaaacctcagacagttttgggcggataaacatcagcctggttcattg
aatggattcacttgccacaaacaagaggctcaacttcttaagcaaattgtgtcccatgac
gtctgtccccacattttgctcaagggaccaactggttcagggaagagagcactaacaatg
gctcttctacgtgaaatatatggtgatgattgttggaatatatcgcatgatctcagatgt
ttccagattcaggaaagaaggccaatgcaagtagtcgttccattaacattcagcactcac
catgtggagctcaatgtaaacttggaagcaaatgctaaatatgcattaatagggttagtc
aaggaaataagcagtcaatatgcagtcccccctgaagtcagcaatgtcaatttcaggcca
gaatataaagtgatagtcctatatgaggttgacaaagcagagcagagcactcagcatctg
atgaagtggatcatggactgttacacagagtcttgcaaactcattctctgctgtgaagat
gatgcagacatccttgaatctgtgaaaacccgctgcaaagttatgaaggttgatgccctt
gttactcatgaaatcatggaggttctaatgcagatagcaagaaaggaggactttgatcta
cctacgacctttgccactaagattgctactaaatcaaagcagaacctgagaaaagcaatc
atggctttggaagcatgcaaagcacacaattaccctttcgatgatgaccaaccagttcca
attggatgggaagaagtcctagacgaacttgctgcagatatcctagctgatccatcgcct
acgagattatcttatatacgggaaaagtttcaaaagcttcttttggattttgtacaccca
aaactcatcctccagaagctcgtggaacagttccttaagcgagtagagactagttcaaag
aggcaactttattattggcatgcttattataataagaaactcccagcaggaacaagtgct
atactgaaattagaagaatttgtggccaagttcatcagtatatacaggaagagttccagt
aatcgtcagtacatatag
DBGET
integrated database retrieval system
