Juglans regia (English walnut): 108997539
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Entry
108997539 CDS
T05245
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
jre
Juglans regia (English walnut)
Pathway
jre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108997539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108997539
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
108997539
Prokaryotic type
Archaeal type
TFB
108997539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
108997539
NCBI-ProteinID:
XP_018829398
UniProt:
A0A2I4FCN3
A0A833UGQ9
LinkDB
All DBs
Position
12:2414131..2417674
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AA seq
525 aa
AA seq
DB search
MKCPYCSSAQGRCATTSSGRSISECASCGRVIEERQSQPHHLFHLRAQDNPLLLVTSDLP
SLDHHHHDRDGEEDPFEPTGFITAFSTWSLESSPLFLRSCLSFSGHLAELERILESSSSS
SSSSSSSSTVVVDNLRAYMQIIDVASILGLDHEISDHAFQLFRDCCSATCLRNRSVEALA
TAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRF
CTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVT
GLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIALGRASATKVDLFESTPSL
DRDKQLEIKANKPNEVPDTGHQVRAKEEAESRGNSYVLNRPPTLWQPQTPLGTSGPRTVS
EKNQNVTRGTDINELHPNRQELEQKADQDTNHVTNPLKPNQLANPPTSSASSVSRQFWPP
PISGPPNVRYVRPPNVVSGYSEHKGTGNQNGNRNANQCRDPCRDP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccgtactgctcatcggcgcagggacggtgcgctaccaccagctccggccgt
tccatatcggagtgcgcatcgtgcggccgcgtgatcgaagagcggcaatcgcagccccac
cacctcttccacctccgcgcccaagacaaccctctcctcctcgtcacctccgacctcccc
tccctcgaccaccaccaccacgaccgcgacggcgaagaagatcctttcgagcccaccggc
ttcatcaccgccttctccacctggtccctcgagtccagccctctcttcctccgctcctgc
ctctctttctccggccaccttgctgagcttgagcgcatccttgaatcttcttcttcttct
tcttcttcttcttcctcctcttcgacggttgtggtcgataatctgagagcctacatgcaa
attatcgacgtagcctcgattctgggcttggaccacgagatatccgaccacgcgtttcag
ctatttagggattgttgctccgctacttgtttgaggaatcgtagtgtggaggcgcttgcc
actgctgctcttgtccaggccattagagaggcccaagagcccaggaccctccaggaaatc
tcaattgcggcgaatgtaccccagaaggagatcgggaagtacatcaagatacttggagaa
gctttacagctaagtcagcccattaacagcaattccatatcagtccatatgccaaggttt
tgcacgcttctccagctcaacaaatctgctcaggagcttgcaactcacatcggagaagta
gttatcaataaatgcttctgcactcgaaggaatcctattagcatctctgcagcggctatt
tatttggcctgccaactagaagacaaacgcaaaacccaggcagagatctgtaaggtgaca
ggcctcactgaggtcactcttcgtaaggtctacaaggagctattagaaaattgggatgat
ttgctcccatctaattacactcctgctgttcctccagagagagcttttcccacaactgtg
attgctttaggccgtgcttcagcaactaaagttgatttattcgaatcaactccttcactg
gacagagacaagcagctagaaattaaagctaacaagccaaacgaggtcccagacacgggc
catcaggttagggcaaaagaggaagctgaaagcagaggcaactcctacgtactgaacaga
ccaccaacactctggcaaccccaaactccacttgggacgtctggtcctaggacagtaagt
gaaaagaatcagaatgttactcgaggaacagacattaatgagctgcaccctaaccgtcaa
gagttagagcagaaggcagatcaagacacaaatcacgtgaccaatcccctgaagccaaac
caacttgcaaatccgccaacttcaagtgcaagttctgtttcccggcagttttggcccccc
cctatttccgggcctccaaatgttcgatatgttcggccaccaaatgtagtgtcaggttat
tccgaacataaaggaactgggaatcaaaatggaaatagaaatgccaatcagtgtagagat
ccgtgtagggatccctag
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