Juglans regia (English walnut): 108997566
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Entry
108997566 CDS
T05245
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
jre
Juglans regia (English walnut)
Pathway
jre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108997566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jre03009
]
108997566
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108997566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
108997566
NCBI-ProteinID:
XP_018829446
UniProt:
A0A2I4FCR9
A0A833U6J2
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All DBs
Position
12:complement(2642940..2655298)
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AA seq
1046 aa
AA seq
DB search
MDLKVRELLKEVRLNYSPAFTKLVDDTIAAIKDAIDKIPEDLLVTADEASGFVRDIGADK
VEFKFKKPKSIDAGGSYAMQCMAKPDINVDLFIRLPKECFHEKDYLNHRYHAKRCLYLCI
IKKYLKLSSLVRKVEWSTLQNEARKPLLVAYPAMELVEVPGFFVRIIPTAKSLFDIKKLN
LKRNNVRALNHGSIPQATPKYNSSILEDMFLEDSEELNRKNLSGRKEFGEASILLKVWAR
QRCSIYGHDCLNGFIISVILSYLASQNKINASMKAMEIFRVTLSFIASSELWSRGLYFKL
EGQKAIPKEERMPYKDTFPVVICNPSAAFNLAFRISRIGFIELQDEAALTLTCLEKCRDG
GFEEIFMTKVDYASKYDYCMRLNLKGKSEVHASGFCMDDECWRLYEQKVYTLLNQGLSDR
AKMIRVTWRNTFSGCSIENGLSIFDREPLLIGVSVSSLEKAFRVVDIGPDAENKNEALKF
RMFWGEKADLRRFKDGKIAESTVWESEQWTRHLILKRISEYVLVRHLSLTKENIVHMVDQ
LDFSLLHGVNDPVSFSGSLLGALEVLTKRLGLIQDIPLKVSSVQPIDPAFRFTSVFPPEP
HPLVIDKGDVPRTHKLMSSCIQPLEVMIQLEGSGHWPMDDLAIEKTKIAFLLKIGESLQN
SWGMKCTATEDDVDVFMSGYVFRLRILHERGLSLVKREIGSDQVKQVTSADKKLFVRSQH
SSMINGLQGRYPIYTPVVRLAKRWVASHLFSACLVEEAVELLVAYIFLKPLPFNNAPCSR
INGFLRFLRLLSEYDWTFSTLVVDINDDLSINDVKEISDNFMLSRKASEETKQNVSAVMF
LATAYDKASEAWTRFSPNSSDLKRLVAYARSSAKLLTKLISQELNDSYKWECLFRTPLNN
YDAVILLHRDKLPYPQRILFPSELNQGKLVACGNASKFFHPLMLPRDLKGSSDEVKTKLL
VDFDPLRCFLGDLENEFSSTFKVWYDSLGGDAVGITWERFSSKKRGREEAGEEGKEDPVD
VLKAVGEVGKGFVRSVYFLKAPRLMN
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggacttgaaagtgagggagctcctcaaggaggtccggcttaactactcgcctgccttc
accaagctcgttgatgacaccattgcggccatcaaagacgccatcgataaaattcctgaa
gacttgctggttacagcagatgaagcttctggtttcgtccgggacattggtgcggacaaa
gttgagttcaagtttaagaagccaaaatctatcgatgctggtggcagttatgcaatgcaa
tgcatggcgaagcctgatataaacgtcgatcttttcattcggttgccaaaggagtgtttt
catgagaaagattatttgaatcatcggtaccatgccaaacgatgcctatacctttgtata
atcaagaagtacttgaagttatcttcattagttcgcaaggttgaatggtctaccctccaa
aatgaggctagaaaacctttattagttgcctatccagctatggagcttgttgaagttcct
gggttttttgtaaggataatccctacagcaaaatcactgtttgacatcaagaaattgaac
ctaaagcggaataatgtccgtgccctgaatcatgggagtattcctcaggctacaccgaaa
tacaatagtagtatattggaagacatgtttttagaggatagtgaagaacttaataggaaa
aatctttcaggaaggaaggagtttggagaagcttcaattttattgaaggtttgggctcgg
caaagatgttcaatatatggtcatgattgcctaaatggatttataatttctgtcatattg
tcataccttgctagtcagaacaagattaacgcttcgatgaaggcaatggagatttttcgt
gttaccttgagcttcattgcctcttcagaattatggagccgtgggctctacttcaagctg
gaagggcagaaggctattccaaaggaggaaaggatgccgtataaagatacttttccggtg
gttatatgtaatccatcagcagccttcaatctagcattccgcatatcaaggattggtttc
attgagctccaagatgaagctgctttgacacttacatgcttagagaaatgcagagatggt
ggatttgaggagatttttatgaccaaggttgactatgcttctaaatatgactattgtatg
agattgaacttgaaggggaaaagtgaggttcatgcatcgggattttgcatggatgatgaa
tgttggaggctatatgagcagaaggtgtatactcttctgaatcaggggttgagtgataga
gcaaaaatgattcgtgtaacatggagaaacacattttcaggatgcagtattgaaaatggc
ttgtcaatatttgatagagagccattactcattggagtttcagtgagctctttggagaaa
gcttttagggtggttgatattggtccagatgctgaaaataagaatgaggctctcaaattc
cggatgttttggggggagaaggctgatcttaggagatttaaagatggtaaaattgcagaa
agcacagtatgggaaagtgagcagtggacaagacatctcattttgaaaagaatttctgag
tatgtgcttgtgcggcatctttccttaacaaaggagaatattgtacatatggtggatcag
cttgatttctcactgcttcatggtgttaatgatcctgtatcattttctggaagtttgctt
ggagcacttgaagttttaacaaagcgcctaggtcttatccaagacattccgttgaaggtt
tctagtgtgcagccgatcgacccagctttcaggtttacctctgtcttccctcccgaacct
catccattggttattgacaagggtgatgttccaaggacacataagttaatgtcatcatgc
attcagcctctggaagttatgattcagttggaaggttctgggcattggccaatggatgac
ttagcaattgaaaagactaaaattgctttccttcttaagattggtgagagtcttcagaat
tcctgggggatgaaatgtactgctactgaagatgatgtggatgtttttatgtctggatac
gtgtttcgtcttagaattttgcatgagagaggcctgagtttggtgaaaagggaaattgga
agtgaccaagttaagcaggtcacttctgcagacaagaaactttttgttcgcagtcagcat
tctagcatgattaatggattacagggtcgttacccaatatatactcctgttgttaggctt
gcaaaacgatgggttgcttcgcatcttttttcagcttgcttggtagaagaggctgttgag
ctgttggtagcctacatcttcttaaaacccttaccattcaataatgctccttgctcccgc
ataaatggatttctaaggttcctacgattattgtcagagtatgactggaccttttctact
ctggttgttgacataaatgatgacttgagcataaatgatgtgaaagagattagtgataac
tttatgttgagtagaaaagcttccgaagaaaccaaacaaaatgtaagtgcagtaatgttt
ctggctacagcttatgacaaagcatctgaggcttggaccagattttccccaaattcatcg
gatctgaaacgattggtggcttatgctcgaagcagtgcaaagttgttgaccaaactcata
tcacaggagctgaacgattcttataagtgggaatgccttttccgaactcctttgaacaac
tatgatgccgtaattcttctccacagggacaaattaccttatccccaacgtattctcttt
ccttcagaactaaaccaagggaagcttgtggcctgtggcaatgctagcaagtttttccac
cccttgatgttgcccagagacttaaaggggagctcagatgaagttaaaacgaagttatta
gtggactttgatccattgaggtgctttctcggggatttagagaacgagttctccagtaca
ttcaaggtatggtatgattctctgggaggtgatgctgtcggcataacgtgggagagattt
tcttccaagaaacgtggccgggaggaagcgggtgaggaaggaaaagaagatccagttgat
gtattaaaagctgttggtgaagtgggcaaaggatttgtcagaagtgtttatttcctgaag
gcaccaaggcttatgaattaa
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