Juglans regia (English walnut): 108997614
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Entry
108997614 CDS
T05245
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108997614
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108997614
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Beta_lactamase3
Lactamase_B_3
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
108997614
NCBI-ProteinID:
XP_018829511
UniProt:
A0A2I4FCY5
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All DBs
Position
16:complement(8476580..8524696)
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AA seq
667 aa
AA seq
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MKARQRGSQKERKFPSMAIECLVLGAGQQVGKSCVVVSMNGKRIMFDCGMDMAYHDHRRH
PDFSRISESGDFDKALTCIVITHFHLDHIGALPYFTEVCGYRGPIYMTYPTKALAPSMLE
DYRKVMVERRGEEEQFTSEHIVECMKKVIAVDVKQTVQVDKDLMIRAYYAGHVLGAAMFY
TKVGDSAIVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTIRDSKYSREAEFLKAV
HKCVLGGGKVLIPTFALGRAQELCILLEDYWERMNLKIPIYFSSGLTMQANMYYKMLISW
TSQKVKETYSTRNAFDFKHVLNFDRSMISAPGPCVLFATPGWISGGFSLEVFKQWAPSEM
NLITLPGYCAAGTIGHKLMSGKRTKIDLDKDTQLDVRCQIHQLSFSPHTDAKGIMDLVKF
LSPKHVILVHGEKPKMATLKGRIYSELGIRCDDPANNETVCIPSTHHVEVGASNTFIRSS
LNPNFNFSKISSEDESDSRLKDGKFMPWLQVKDERAAEGILVEEKSKRAKIVHQDELLLM
LGEKKHDIRFAYCFPINTDNLEDTKSTDVSSSSNALSMSGRCSWLPMLYIKLSDELSGGN
IQYFGEQIQVESFSVSLCLKDRCPYRIVDSPPNKCEAVFFCCTWSIADEKLAWKIISILE
NLDYGTC
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcgccaaagaggatcccagaaagaaagaaaattccccagcatggcgatcgag
tgtctcgtcctcggcgctgggcaacaagtcgggaagagctgcgtggtagtatcgatgaat
ggtaagcggataatgttcgattgcgggatggacatggcatatcacgaccaccgccgccac
cctgatttctcccgcatctccgagtccggcgacttcgacaaagccctcacttgcatcgtc
atcacccacttccatttggaccacatcggtgctcttccttacttcactgaagtctgcgga
taccgtggacccatatacatgacgtatccaacaaaggcattggctccttcaatgttggag
gattatcgaaaagtgatggttgaacgaagaggggaagaggaacaatttacctcggagcat
attgtggaatgcatgaagaaagttatagcagtggatgtaaagcagacggtacaggttgat
aaagatcttatgattcgtgcctactatgcaggacatgttcttggagcagcaatgttttac
acaaaggtgggagattctgctatagtttacacgggagactataatatgacaccagataga
catctgggagcagctcaaattgatcgactacagctggaccttctaatcacagagtccaca
tatgcaacaactatacgtgactcgaaatacagtcgggaggcagaatttcttaaagctgtt
cataaatgtgttctgggaggaggaaaggtgctcattcctacatttgctctcggaagagct
caggagctctgcatcttgttggaggattactgggagcgaatgaatttaaagattcccatt
tacttttcatcaggtctgaccatgcaagccaatatgtattataaaatgcttatcagttgg
accagccagaaggtgaaagagacatattccacacgtaatgcatttgattttaaacatgtt
ctcaattttgaccgttcgatgatatctgctcctggaccttgcgttctttttgctacacct
ggctggattagtggcggtttttcgcttgaggttttcaagcagtgggctccatctgaaatg
aatcttatcaccttgcctgggtactgtgcggctggaaccataggacataaattgatgtcg
ggtaaacgcaccaaaattgatctggacaaagatactcaactcgatgtgcgatgccagatt
catcaattgtctttcagtcctcatacagatgccaaagggattatggatcttgtcaagttt
ctctcccccaaacatgtgatcctagtacatggtgagaaacctaagatggctactcttaaa
ggacgaatatattcggaattgggaattcgatgtgatgaccctgcaaacaacgagacagtt
tgcattccttctactcatcatgtggaagtaggagcctcaaacacttttattcgaagtagc
ttgaatccaaacttcaatttttctaaaatcagttcagaagatgaatccgattcgcgttta
aaagatggaaagttcatgccatggctgcaggtaaaagatgaaagggcagctgaagggatc
ttggttgaggaaaagagtaaaagagcaaagatcgttcaccaagacgagcttcttcttatg
ttgggagaaaagaagcacgacattcggtttgcttactgtttccccataaatactgacaat
ttagaagacaccaagagcacagatgtatcttcatcaagtaatgcactttccatgtctggc
agatgctcttggcttcccatgttgtacattaaactttcagacgaactttctggaggaaac
atccaatactttggggaacaaattcaagtagagtcatttagtgtatcactctgtctgaag
gacaggtgcccttacagaatagttgacagtcctccaaataaatgtgaagcagtgtttttt
tgctgcacttggtcgatagcagatgagaagcttgcttggaaaatcatctcgatattagaa
aatctcgactatggaacttgttga
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