Juglans regia (English walnut): 108997615
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Entry
108997615 CDS
T05245
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
jre
Juglans regia (English walnut)
Pathway
jre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108997615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108997615
03036 Chromosome and associated proteins [BR:
jre03036
]
108997615
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108997615
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108997615
PBAF complex
108997615
GBAF(ncBAF) complex
108997615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
108997615
NCBI-ProteinID:
XP_018829547
UniProt:
A0A2I4FD18
A0A833Y2Z3
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All DBs
Position
2:676575..680939
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AA seq
557 aa
AA seq
DB search
METTTHDPTSKPDEPELDLYTIPSHSSWFLWDEIHETEKLALREFFDGSSFSRTPKIYKE
YRDFIINKYREEPSRRLSFTDVRKSLVGDVSLLHKVFRFLDERGLINFSAPSGNNTSLVV
VEDGEDRSRIKIEGVVPNAVRVGASPNSPKPISVPPNVVDNAVLNGFKFLPLASYSDVFG
DLVKPKGLICGNCGGICDSGHYKYTKGEFIICINCFKNQNYGENRSMDEFKLNECAENKG
SDGAIWTEAETLLLLESVLKHGDDWELVAQNVQTKSKVDCILKLIELPFGELVLGSAHKY
GNYGGLNGSMNGTKQVQLSSSEHHEAIRLEGQCHEQINEMEENGDTVDQGHPSKRQRIAS
LSDAGSSLMKQVARISTMVGSQTTAAAAEAAVTALCDENSFPREIFDVEEDHISNGFSPP
TASYEAERVFKNEESKTKEGLTQSETANTPHKRDDIPLTLQIRASIATALGAAAARAKLL
AEQEDREVENLVAIIIETQMKKLHQKIKHFEDLELIMEKEYAEMEELKDCLLAERIGVLQ
KAINAGISRWRDHSVKS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacaacacatgacccgacttctaaacccgacgaaccagagctcgacctctac
accattccaagccactctagttggttcttgtgggacgaaatccacgaaactgagaaactc
gctctaagagaattcttcgacggaagctctttttcaaggacgcccaaaatatacaaggag
tacagagattttatcatcaataagtacagagaagagccttcgaggcggcttagcttcact
gacgtccgaaaatcactggtgggcgatgttagcttgctccacaaggtttttaggttcttg
gacgagcggggtttgataaatttcagtgcgccttccggtaacaatactagtttagttgtg
gtggaggatggggaggataggtctagaattaagattgagggtgttgtccccaatgcggtt
cgagttggggcctcaccaaattcgccaaagcctatttccgtgccaccaaacgtcgtggat
aatgcagttctgaatggattcaagtttctgccattggcgtcctattcagatgtttttggt
gatttggtgaagccaaaggggttgatttgtggaaattgtggtggaatttgcgactctggt
cactataaatataccaagggtgaattcataatttgcataaactgtttcaaaaatcaaaat
tatggggagaacaggtctatggatgaattcaagctcaatgagtgtgcagaaaacaagggt
agtgatggagctatctggactgaggcagaaaccctacttcttttagaatctgtattgaag
catggggatgactgggagcttgttgctcaaaatgttcaaaccaaaagcaaggttgattgt
atattgaaactcattgaattgccttttggagagcttgtgttgggttctgcccacaaatat
ggtaattatggtggcctcaatggcagtatgaatggaacaaaacaagtccagttatcttca
tctgaacatcatgaagctatcagattagagggtcaatgtcatgaacagattaatgaaatg
gaggagaatggagacactgtggaccaaggtcatccttcaaaaagacagcgcattgcatcc
ctttcagatgccggtagttcacttatgaaacaggttgctcggatctcaaccatggttggt
tctcaaaccacggctgctgcagctgaggctgctgttacagcactttgtgacgaaaactca
tttccaagagagatctttgatgttgaggaggatcatatttctaatggattttctcccccc
actgcaagttacgaagcagaaagagtatttaagaatgaagaatctaagacgaaggaaggt
ttgacccaatcagaaactgcgaatacaccccacaagagggatgatatacctctaactctg
caaattagagcatcaattgcaacagctcttggggcagctgctgctcgtgctaaattgtta
gctgagcaggaggacagagaggttgaaaatttggtggcgatcataattgagacacagatg
aaaaagttgcaccagaaaatcaagcattttgaagatctggagctgataatggagaaggaa
tacgctgaaatggaagaacttaaagattgccttttagcagaacggattggagtcctacag
aaggcaatcaatgccggtatctctagatggagggatcactctgtaaaatcttaa
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