Juglans regia (English walnut): 108997972
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Entry
108997972 CDS
T05245
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
jre
Juglans regia (English walnut)
Pathway
jre04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108997972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
108997972
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108997972
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
108997972
NCBI-ProteinID:
XP_018829906
UniProt:
A0A833TM22
A0A2I4FE28
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Position
8:complement(12101256..12105043)
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AA seq
584 aa
AA seq
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MQRMACSFPDEVLEHVFSFVQCDNDRNAISTVCKSWYKIERWSRRRVFVGNCYAISPGMV
IRRFPELRSIELKGKPHFADFNLVPDGWGGYVAPWISAMAAAYPWLEEIRLKRMVITDEN
LELIAKSFKNFKVLVLSSCEGFSTEGLAAVAANCRNLRELDLRESEVEDLSGHWLSHFPD
DYTSLVSLNIACLGCEVSFSALERLVGRCPNLRTLRLNRAVPLDKLANLLRRAPQLVELG
TGAYSSELRPDVFSNLSGAFSGCKELKSLSGFWDVVPGYLPAVYPICCRLTTLNLSYATI
QSPDLIKLVGQCQNLQRLWVLDYIEDAGLDAVAASCKGLRELRVFPSDPFGPEPNVLLTE
QGLVSVSEGCPKLQSVLYFCRQMSNAALMTIARNRPNMTRFRLCIIEPGTPDYLTLQPLD
VGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGESDLGLHHVLSGCE
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVTFGACKLLGQKMPRLNVEVIDER
GPPDSRPERCPIEKLYIYRTVAGPRFDMPGFVWTIDEDSAMRLS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaatggcctgctcttttccggacgaagtgctagagcacgtgttctcgttcgta
cagtgcgacaatgaccggaatgcgatctcgacggtgtgcaagtcctggtacaagatcgaa
cggtggagcaggaggcgggtcttcgtcgggaactgctacgcgatcagccccggtatggtg
atccgacggttcccggagctgcggtccatcgaactcaaggggaagccacactttgccgac
ttcaacctcgtccccgacggatggggtggctacgtggccccatggatctccgccatggcg
gccgcttacccttggctcgaggagattcggcttaagcgtatggtcatcacggacgagaac
ttggagctcattgccaagtccttcaagaactttaaggtcctcgtgctgtcctcctgcgag
ggcttcagcaccgagggcctcgccgccgtcgctgccaattgcaggaatctgagagagctg
gacttgcgggagagcgaagtggaagacctgagtgggcactggctcagccattttcctgat
gactacacctcactggtgtcccttaacattgcctgcttagggtgtgaggtgagtttctct
gccctggagcgcctagtgggtaggtgccccaacctgaggactcttcggctcaaccgtgct
gtgccccttgacaagcttgcaaacctacttcgtcgggcacctcaactggttgagttgggc
acaggggcttactcatctgagttgcgacctgatgtattctccaacctatcaggagctttt
tctggatgcaaggaactgaagagcctatcgggtttttgggatgtagtccctgggtatctt
ccagctgtttaccctatctgctgtaggttaacaacattgaacttgagctatgctaccatc
cagagccctgatctcatcaagctagttggccaatgtcagaatttgcagcgcttatgggtg
ctggattacattgaagatgctggccttgatgccgttgcagcatcttgcaagggtctacga
gaattgagggtgtttccatctgatccatttggaccagaacctaatgtactgttgacagaa
cagggccttgtctccgtttctgaaggctgccctaagctccagtcagttctgtacttttgc
cgtcaaatgtctaatgctgccttgatgaccattgccaggaatcgacctaatatgaccagg
tttcgtctttgtattattgagcctggaactcctgattaccttacccttcaaccacttgat
gttggatttggagccattgttgagcactgcaaggatctacaacggctttccctttctggt
cttctcaccgatcgtgtgtttgagtacattgggacttatgccaaaaaattggagatgctg
tctgtggcctttgctggagaaagtgatttgggactccatcacgtgctgtctggttgtgaa
aaccttaggaagctggagattagggactgcccctttggtgacaaggctcttttggccaat
gctgcaaagctggagacaatgcgatccctttggatgtcttcttgctctgtaactttcgga
gcatgtaagctactaggtcagaagatgccgaggcttaatgtagaggttattgatgagagg
ggacccccagattcaagaccggaaagatgccctattgagaagctttacatatataggact
gttgctgggccaaggtttgacatgcctggttttgtttggacaattgatgaagattcggcg
atgaggctttcttga
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