Juglans regia (English walnut): 108998021
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Entry
108998021 CDS
T05245
Name
(RefSeq) thioredoxin-like protein YLS8
KO
K12859
U5 snRNP protein, DIM1 family
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108998021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108998021
Spliceosome [BR:
jre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108998021
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
DUF3192
Motif
Other DBs
NCBI-GeneID:
108998021
NCBI-ProteinID:
XP_018829989
UniProt:
A0A834D5W5
A0A2I4FEB1
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All DBs
Position
2:complement(12862797..12868025)
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AA seq
142 aa
AA seq
DB search
MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETLKNFAVIYL
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacctgctgccgcacctgcactctggatgggctgtagatcaggccatcctggct
gaggaagagcgactcgtcgtcattcgtttcggccatgattgggacgagacctgcatgcag
atggatgaagtgctagcatctgttgctgagacacttaagaactttgctgtaatatatctt
gtggacatcaccgaggtgcctgatttcaacacaatgtacgagctctatgacccatccaca
gtcatgttcttcttccgaaacaagcacattatgattgaccttggcactggaaacaacaac
aagattaactgggctatgaaggacaagcaagagttcattgacattgttgagacggtgtat
cgtggtgcaaggaagggtcgtggtttggttattgcaccgaaggactactccaccaagtac
cgctactaa
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