Juglans regia (English walnut): 108998098
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Entry
108998098 CDS
T05245
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108998098
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
108998098
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
108998098
NCBI-ProteinID:
XP_035551692
UniProt:
A0A6P9FAQ1
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Position
11:5497462..5513039
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AA seq
773 aa
AA seq
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MAVGLPTLDGESERKTHGERNEGETEWEEPPTNQKNVSLPGNLRRHAADLGDGESSPAVF
VGCHHANELSVEGEGGSLRWPNGALFLDNENKGFQGLQTEATGRWVVASCGWARWGVLLN
VNAAQESNVDDDHDVELHTYDDLQVVVDNGLMQVNLSRPAGDVVGITYGGIDNLLENHNR
WENRGYWDVVWKQPGELKLCNRLAATNFTIITETEDQVELSFTKTWDASNNSLHGKTNIP
LNVDRRYIFRRGISGYYSYAIFERPKGWPALFLGQIRAVYKLEQDNFHYMAISDKKRRIM
PTPLDRKRGQPLAYPEAVLLSNTTSNPELRGEVDDKYQYSMEDKDIRVHGWMSVAPPVGF
WIITPSNEFRTAGPIKQDLTGHVGPTLLSMFMSTHYTGRDLHMRFEDGEPWQKVFGPIFV
YLNSGSTKTRKRLWGEAKQQMLSEVNSWPYNFTKSEDFPSADQRGTVVGQLQVDDQYITD
EKLMRAKSAYVGLAAPGGVGSWQTESKGYQFWTQADDEGRFVIKNVRAGDYNLYAWVPGV
IGDYKNDMQITIKPGSKVELGVVVYRPPRNGPTLWEIGIPDRTAAEFFIPDPKPTLTNRL
FNHTEKYRQYGLWDRYADLYQDDQDLIYTVNISNYSKDWFYAHVTRKLNNQTYEGTTWQI
KFELENATNDGNYTLQLALASAHFAEIQVRFNDPSLQRAHFSTGLIGRDNAIARHGIHGL
YRLYNIEVPSNLLQEGTNRIYLTQSRRRSPFIGVMYDYLRLEGPPHDHACLNA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggggttacctacactggatggagagagtgagagaaagacgcacggtgagaga
aatgagggagagaccgagtgggaagaaccgccaaccaaccaaaaaaacgtgagcttaccg
ggaaacctgaggcggcatgcggcggacctgggtgatggggagtcctcaccggcagttttt
gtggggtgtcaccacgcgaatgagctttcggtggagggtgaaggtggcagcttaaggtgg
ccgaatggtgctctgtttttggataacgaaaacaagggatttcaaggcttgcaaacagag
gctacggggcgttgggtagtagcttcgtgcggctgggcacggtggggagttctattaaac
gtcaacgccgcccaagaatctaatgttgatgatgatcatgatgtggagctacatacatac
gacgacctgcaggtggtggtggataatgggctcatgcaagtcaatttgtccaggccggcg
ggtgatgttgttggaattacgtatggtggtatagataacttactcgaaaatcataataga
tgggagaatagagggtattgggatgtagtttggaagcagccaggagaactaaaactatgc
aacagattggcagcaacaaacttcacgattataaccgagaccgaagaccaagtagagctt
tcatttactaaaacatgggatgcttctaataattcgctacacggaaagacaaatattccc
ttaaatgtagacagaaggtacatatttcgacgtggaatttcaggatattattcatacgct
atatttgagcgccctaagggatggccggctttgtttctgggtcagattagggctgtttac
aagctggaacaggacaattttcactacatggcgatatcggacaagaagcggaggatcatg
ccaacgccgctagatcgcaaaagaggtcaaccccttgcctacccggaagctgttctttta
agcaatacgacctccaatcctgaactaagaggagaggtggatgacaagtaccagtactcg
atggaagataaagatattagggttcatgggtggatgtccgttgccccacctgttggattt
tggatcattacacccagtaatgagttccgtacagcgggacccatcaaacaagatctcact
ggccatgtgggccctactctgctctctatgttcatgagcactcattacactggtagggac
ctacacatgagatttgaagacggagagccatggcaaaaagtttttggtcctatatttgtc
tatctcaactccggttccaccaaaactcgtaaaagactctggggcgaagctaaacagcag
atgttgagtgaagtcaatagctggccatacaatttcactaagtcggaagatttcccttct
gctgaccaacggggaacagttgtgggtcaattgcaagtcgatgaccagtacatcactgat
gagaaactaatgagggcaaaatctgcttacgtgggtttggctgctccgggaggggtcggc
tcatggcaaaccgaaagcaagggttaccaattctggacccaagctgacgacgagggacgt
ttcgtaattaaaaacgtccgagcaggagactacaatttgtatgcatgggtccctggtgtg
attggagattacaaaaatgacatgcaaattactattaaaccaggctcgaaagtggaattg
ggtgtggttgtgtataggcctccgaggaatggtccgactctgtgggaaattggcattcct
gaccggaccgctgcggagttctttataccggacccaaagccaacgctcacaaaccgattg
ttcaatcacacagaaaagtataggcaatatggcttatgggatcggtatgcagatttatat
caggatgatcaggatctcatttatactgttaatattagcaattatagtaaagattggttc
tacgcccacgttacaaggaaactaaataatcaaacatacgaaggaacaacatggcagatc
aaatttgaactagaaaatgccaccaacgacggaaactacacactgcagttggcattggcg
tctgcccattttgctgaaatacaggttcggttcaatgacccgagtctacaacgtgcacac
ttctcaacgggactcataggaagggataatgcgatagcaagacacggaattcatggatta
tatcggttgtacaacattgaggtaccaagcaatctattgcaagaaggaaccaataggatc
tatctcacacagtcaaggaggagaagtccttttataggagtcatgtatgactacctccgt
ttagaagggcctccgcatgatcatgcatgcttgaacgcataa
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