Juglans regia (English walnut): 108998365
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Entry
108998365 CDS
T05245
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108998365
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
jre01002
]
108998365
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
108998365
04121 Ubiquitin system [BR:
jre04121
]
108998365
Enzymes [BR:
jre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108998365
Peptidases and inhibitors [BR:
jre01002
]
Metallo peptidases
Family M67
108998365
Membrane trafficking [BR:
jre04131
]
Endosome - Lysosome transport
Others
Others
108998365
Ubiquitin system [BR:
jre04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
108998365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
108998365
NCBI-ProteinID:
XP_018830455
UniProt:
A0A2I4FFM7
A0A833XQ64
LinkDB
All DBs
Position
6:30268337..30280680
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AA seq
529 aa
AA seq
DB search
MRPSCDGINVAASAQKLVVDNRISLRYYYRIADNILKQADIFRRERNIIDLYVMLLRFSS
LVSETIPNHRDYKASLQSQKAYLKKRFLSALAELEKLKPAVQLKITELNRKDTYQVDGRG
QFHQNNSLDWSPVKKQTSTNYDLIKAARPATHQLLYQGSRAQQYPYAKPVEQRFSKMSLG
FPLPKKETLSRHSILGPNGLSGHWHPPISDKGVRYPSTVDLTPVEIPSLQETIDDGLSVK
TDSGNSEDETSSVELILTQADNTLMHHVAEPGSLISFEPTESPAQPDIIRQPSPPPVLAE
VQDLVPAVSQHNPSNVLAELQDLIPAVSSQVSEVEHGMGTSPQDNLVGAESPLQLHISTT
MMETFMKLAKSNTDRNLETCGVLAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEV
QDKQSLFPLGWIHTHPSQSCFMSSIDVHTHYSYQIMLPESVAIVMAPRDGSRKHGIFRLT
TPGGMSVIRQCQQRGFHPHDPPPDGGPIYKTCTDVYMNPKLKFEVIDLR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaggccatcttgtgatggaattaacgtcgccgccagcgctcagaaacttgttgtcgat
aatcggatttctctccggtactactaccgaatcgctgataatattctcaaacaggctgac
atctttcgaagagagaggaatatcatagacctatatgttatgcttctaagattttcaagt
ttggtctctgagaccataccaaaccatcgagattacaaagcctctcttcaaagccaaaaa
gcttatttgaaaaagagattcttgagtgcattggctgagctggagaagctgaagcctgca
gtgcaactgaagatcactgaactgaacagaaaagacacatatcaagtagatgggcggggc
cagtttcatcaaaataattcattggactggtctccagtgaaaaaacagacctcaactaat
tatgacttaataaaggcagcaagaccagctacacatcaattattgtatcaaggttcaagg
gctcaacaatatccatatgctaagccagtggaacagcgattcagcaaaatgtctttaggt
tttccacttccgaagaaggaaactctctctagacattctatattgggtcctaatgggctt
tctgggcattggcatccccctataagtgataaaggggtccgatatccaagcactgtagac
ctgactccagttgaaattccaagcctgcaggaaaccatagatgatggactttcagttaaa
acagatagtggaaattccgaagatgaaacatcaagtgtggagttgattcttacccaggct
gataatactctgatgcatcatgttgcggaacctggttcactgatttcctttgaaccaaca
gaatcccctgctcagccagatattatcagacagccttctcctccgcctgtacttgctgaa
gtacaggatttggttcctgcagtgtcacagcataacccttcaaatgtacttgcagaatta
caagatttgatacctgcagtgtcatctcaagttagtgaggtagaacatggaatggggact
tccccacaagataatttggttggtgctgaatctccactgcaattgcacatttcaaccaca
atgatggagacctttatgaagcttgctaagtcaaacacagatagaaacttagaaacatgt
ggtgtccttgcaggttcacttaaaaacagaaagttttatattacggccctcatcattcct
aagcaggaatcaacatcagattcttgtcaggcaacaaatgaggaggaaatatttgaagtg
caggacaagcaatctctcttcccacttgggtggattcatacacatccttctcagtcttgt
ttcatgtcatcaattgatgttcacacccattactcatatcagattatgttgcctgaatct
gttgcaatcgtcatggcacctagagatggttcaagaaagcatggcattttccggttgaca
acccccggtgggatgtctgtcattagacaatgtcagcagcgtggctttcatccacacgat
ccacctcctgatggtgggcccatatacaagacttgcacagatgtttacatgaatcccaaa
ctaaaatttgaggtcattgatcttcggtga
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