Juglans regia (English walnut): 108998670
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Entry
108998670 CDS
T05245
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre04120
Ubiquitin mediated proteolysis
jre04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108998670
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108998670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
108998670
Enzymes [BR:
jre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108998670
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108998670
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108998670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_DCAF12
WD40_like
Beta-prop_WDR75_1st
WD40_RFWD3
DUF6481
Pox_Ag35
Beta-prop_NOL10_N
GSK-3_bind
Motif
Other DBs
NCBI-GeneID:
108998670
NCBI-ProteinID:
XP_035550843
UniProt:
A0A6P9F4N4
LinkDB
All DBs
Position
1:9360988..9363137
Genome browser
AA seq
406 aa
AA seq
DB search
MRNFSTKFHPQDREEPTSQERKLEEKESIKDDREEEKEEEKEEEEEEEEETRAICEWEFN
LSTTVSSSTAGAVSDTLGVIEFDPSDSFVATGGIARKIRIYSLRSLLPQGERSNTASTLL
DHASACEFYICTPAKLSSMRWKPGSGGRVLGSGDYDGVVMEYDLERRMPIFERDEHGGRR
VWSVDYSHCDPVIGASGSDDGTMQMWDPRCEGGRCVGTVQPSVGRSPVCCVEFNPVAGAL
IAVGCADRKAYGYDIRRMADPVVVFDGHSKTVTYVRFLDAQMIVSAATDGCLKLWNINDS
RVIRTYKGHVNNRNFVGLSVWRNGGLFGCGSENNQVYVYDLRWGEPIWVHGFEPVSRAGR
EYGFVSSVCWRQVGDESCTLVAGGSDGVLQVFVGKRKPGLIRLSHK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacttctccacaaaattccatccgcaggaccgagaagagccaacgtcccaagaa
agaaaattagaagaaaaagaaagcataaaggacgatagagaagaagagaaagaagaagag
aaagaagaagaagaagaagaagaagaagaaacaagagctatatgtgaatgggaattcaat
ctctccactactgtctcttctagcacagccggagccgtgtcggacactctcggagtgatc
gagtttgacccgtctgacagctttgtagccaccggtggtatcgcgagaaagatcagaatt
tacagtttacggtctttgctaccacaaggtgagcgtagtaataccgcttccactttgtta
gaccatgccagtgcatgtgagttctacatctgcaccccagctaagcttagcagcatgagg
tggaaacccggttccggaggacgagttttggggtcaggagactatgatggggtggtcatg
gagtatgacctggagagaagaatgcccatttttgagcgggacgagcatggcggccgccga
gtctggagcgtggactattcgcattgtgatccggttataggggcatcggggtcggacgac
ggcaccatgcagatgtgggatccacgatgcgaaggtgggagatgcgtgggtacggtgcag
cccagcgtggggcgtagtcccgtctgctgtgttgaattcaatcccgttgctggggcatta
atcgccgtcggatgtgcggaccggaaggcttacgggtacgacatcagaagaatggcggat
ccggttgtggtgtttgacgggcacagtaaaaccgtaacttacgttcgatttctggatgcc
caaatgatcgtctcagccgcgacggatgggtgtttgaagctgtggaatatcaacgactcc
cgtgtgattcgcacctacaagggacacgtgaacaaccggaactttgtcgggttatcagtg
tggaggaatggcgggttattcggttgcggatcggagaacaaccaggtttatgtgtacgat
ttgaggtggggcgagcctatatgggtgcatgggttcgagccagtgagtagagccgggcgc
gagtatgggttcgtcagtagcgtgtgttggaggcaagtgggggacgaaagctgcacactc
gtggcagggggatcagatggagttctgcaggtttttgtgggcaaaaggaagccaggttta
attagactgtcccataaatga
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