Juglans regia (English walnut): 108998692
Help
Entry
108998692 CDS
T05245
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108998692
09123 Folding, sorting and degradation
03018 RNA degradation
108998692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108998692
03041 Spliceosome [BR:
jre03041
]
108998692
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108998692
mRNA degradation factors
5'-3' decay
Lsm complex
108998692
Spliceosome [BR:
jre03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108998692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
108998692
NCBI-ProteinID:
XP_035541231
UniProt:
A0A6P9E1L0
LinkDB
All DBs
Position
14:complement(25693815..25717727)
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQGDGV
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccgcaaagaaacagttttagatcttgccaagtttgttgataagggtgtccag
gtcaagcttactggtggtagacaagtcacaggaaccttgaaaggttatgaccagttgctg
aaccttgtccttgatgaagctgtagaattcttgagagatccagatgatcctctgaagact
actgatcaaactagacgtcttggcctaatagtatgtaggggcactgctgtgatgcttgtt
tccccaactgatggcactgatgaaattgcaaaccccttcatccaaggggacggggtgtag
DBGET
integrated database retrieval system