KEGG   Juglans regia (English walnut): 108998692
Entry
108998692         CDS       T05245                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
jre  Juglans regia (English walnut)
Pathway
jre03018  RNA degradation
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108998692
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108998692
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    108998692
   03041 Spliceosome [BR:jre03041]
    108998692
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108998692
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108998692
Spliceosome [BR:jre03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    108998692
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 108998692
NCBI-ProteinID: XP_035541231
UniProt: A0A6P9E1L0
LinkDB
Position
14:complement(25693815..25717727)
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQGDGV
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtccggccgcaaagaaacagttttagatcttgccaagtttgttgataagggtgtccag
gtcaagcttactggtggtagacaagtcacaggaaccttgaaaggttatgaccagttgctg
aaccttgtccttgatgaagctgtagaattcttgagagatccagatgatcctctgaagact
actgatcaaactagacgtcttggcctaatagtatgtaggggcactgctgtgatgcttgtt
tccccaactgatggcactgatgaaattgcaaaccccttcatccaaggggacggggtgtag

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