Juglans regia (English walnut): 108998843
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Entry
108998843 CDS
T05245
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A-like isoform X2
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
108998843
Membrane trafficking [BR:
jre04131
]
Protein recycling
Others
EARP complex
108998843
Endosome - Golgi transport
Tethering complex
GARP complex
108998843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
PWI
Motif
Other DBs
NCBI-GeneID:
108998843
NCBI-ProteinID:
XP_018831105
UniProt:
A0A2I4FHH2
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Position
10:complement(661676..683417)
Genome browser
AA seq
732 aa
AA seq
DB search
MIMADVTMSNVEQSYGETNDAQKNVFDLGAFVGDLTIEEDVSSDDISLEGLQQELEECKN
DDVVANILSKGAKLREYTKGVENNLRQVEFDSIQDYIQESNNLVSLHDQIRECDSILSQM
ETLLGGFQAEIGSISSDIKTLQEKSMDMGLKLKNRKVAESKLAKFVEDIIVPPRMVDIIV
DGEVNDEFMRTLEILSKKLKFVEVDPMVKASKALKDVQPELEKLRQKAVSKVFDFIVQKL
YALRKPKTNIQILQQSVLLKYKYVVSFLKEHGNEVYTEVRGAYIDTMNKVLSAHFRAYIL
ALEKLQLDIATSSDLIGVEARSTGLFLRGREPLKNRSAIFALGERIKILKEIDEPALIPH
IAEASSSKYPHEVLFRSLHKLLMDTATSEYHFCDDFFVEESMFYEIFAGPFAVIDEHFNS
ILSNCYDAIGLMLMIRITHQHQLIMSRRRIPCLDLYLDKVNISLWPRFKMVFDMHLNSLR
NANVRTLWEDDVHPHYVMRRYAEFTASLIRLNVEYGDGQLELNLERLRMAVDDLLIKLAK
IFPKTKLQIVFLINNYDMIISVLKEASPDVGKIQMHFEELLKSNTALFVEELLLEHFSDL
IKFVKTRASEDPSSGSEKAIAVGEVELLAKDFGSRWKAAIELMHKDVITSFSNLLCGMEI
LRAALTQLLLYYTRLTDCIKRIVGGSSLNKDLVSISSIIRFSLSLARARKEAHTRACKAN
RYNSGLDSYVFG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgattatggccgatgtcacgatgagcaatgtggagcagtcttatggagaaacgaatgat
gctcagaaaaatgtatttgatttaggagcttttgttggggacttgactattgaggaggat
gtgagcagtgatgacatatcattggaaggcctacaacaagagctagaagaatgtaaaaat
gatgatgtagttgcaaacatactatcaaaaggtgcgaaattaagggagtatacaaaggga
gtcgagaacaatttacggcaagtcgaatttgattctattcaggattatatacaagaaagc
aataatttagtgtctcttcatgatcaaattcgtgaatgtgacagcatcttgtcacagatg
gaaactctccttggtggatttcaagctgaaatcggttccataagttcagacataaaaacc
ctccaggagaagtctatggatatgggtctgaagcttaagaatcgtaaggtagctgaatca
aaattggcaaaatttgttgaagacattatagttcctccacggatggttgacataattgtt
gatggagaggtcaatgatgaattcatgagaactcttgagattctaagcaagaagctgaag
tttgtagaagtggatcctatggtcaaggcttcaaaagctctaaaagatgttcaacctgag
ctagaaaaactacggcagaaagcagtttcaaaggtctttgacttcattgttcagaagctt
tatgcattgagaaagcccaaaacaaatatccagatccttcaacagagtgttcttctaaag
tacaagtatgttgtttcctttctcaaagaacatggcaatgaagtatataccgaggtccga
ggagcatacattgacacaatgaacaaggtcttaagtgcacatttccgtgcttatattctg
gctctggagaaactacagttggatatagcaacatcaagtgatttgattggtgtggaggca
agaagcactggtctttttttaagaggaagggaacccctaaagaaccggtctgcgattttt
gctttgggggagaggataaaaattttgaaggaaattgatgaacctgctttaattcctcat
atagcggaagccagctccagcaagtatcctcatgaggtgctcttcaggagtttgcacaag
ctgcttatggatactgctacttctgagtatcatttctgtgatgatttctttgttgaggaa
tccatgttttatgagatttttgcaggtccattcgctgtcattgatgagcatttcaattca
atactttcaaattgttatgatgctattggcttaatgctaatgattcggataacacatcaa
caccagctcattatgtcacggcgacggattccatgcttggatttatatctagacaaggtc
aatatttccctatggccccgtttcaagatggtatttgacatgcatctcaatagcctgcgc
aatgcaaatgttaggacgttatgggaagatgatgttcaccctcactatgtcatgaggcgt
tacgctgaatttacagcttcactaatccgcctcaatgttgaatatggagatgggcagctt
gaattgaatttggaaagactgagaatggcagttgatgacttgcttatcaagcttgcaaaa
attttcccaaaaacaaaactacaaattgtgtttctgattaacaactacgatatgataatt
tctgttttgaaggaagctagtccagatgttgggaaaattcaaatgcactttgaggaactg
ctgaagagcaacactgcgttatttgtggaagagctgctactagagcatttcagtgattta
ataaagtttgtaaagacccgagcctcggaggacccaagttctggttctgagaaagccata
gctgtgggggaagttgagctacttgcaaaggactttggaagtagatggaaagctgcaata
gagctgatgcataaagatgtcataacttctttcagcaacttactgtgtggcatggagatt
ttgagggctgcgttgactcagctgctgctctattatacgaggctcacggactgcataaag
aggattgttggtgggtcctcgctgaacaaggatctggtgtccatatcttcaatcataagg
ttctctctctctctcgcgcgcgcgcgcaaagaagcacacactcgtgcatgtaaagcaaac
agatataactctggtttggactcttatgtattcggctag
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