Juglans regia (English walnut): 108998950
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Entry
108998950 CDS
T05245
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108998950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108998950
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108998950
mRNA degradation factors
5'-3' decay
Decapping complex
108998950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
108998950
NCBI-ProteinID:
XP_018831265
UniProt:
A0A2I4FHY4
A0A833TVT3
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Position
14:complement(21034157..21056122)
Genome browser
AA seq
371 aa
AA seq
DB search
MSQSGKLMPNLDQQSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNS
RECEEVANLFSRILNAYSKVPQKSTVPSNKSEFEELEAVPTMAVMDGPLEPPSSTAFNPP
DVPDDPSFVNFFSAAMTIGNVSNAVMTAQPYQSSATDPPNSHPVGVASPTVPTLQIPSPP
LSSSTPLMPLLYTTESNSNSNRATNLIKPSSFFVPPPSSSAMMMLPVSSSVPTAPPLAPA
ATLQRPYGSPLLQPFPPPTPPPPSLTPASVPTPNYGPAISRDKVQEALLVLVQDNQFIDM
VYRALLNAHNS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagagcgggaagctgatgccaaatctggaccaacagagcacgaagctcctcaac
ctcaccgttctccagcgaatcgaccccttcgtcgaagagatcctcattaccgctgctcac
gtcactttctacgagttcaacatcgacctcagccaatggagccgcaaggacgtcgaggga
tctctcttcgtcgtgaagaggaacacgcaaccacgttttcagtttattgtgatgaaccgg
cgcaatacggataatttggtggagaatctgttgggagattttgagtatgaagtccaggtt
ccatatttattatatcgaaatgcagcacaagaagtgaatggtatttggttttacaattca
cgcgaatgtgaagaggttgcaaatcttttcagcaggatacttaatgcttactccaaggtg
cctcaaaagtcaacagtgccttcaaacaaaagtgaattcgaggaattagaagcagtacca
actatggcagttatggacggtcctctggagccaccgtcatctactgccttcaatccccct
gatgttcctgatgacccttcctttgtgaacttcttcagtgcagctatgactattgggaat
gtttcaaatgcagtgatgactgcacaaccttatcagtcctctgcaacagaccctccaaat
tcccatccagttggtgttgcctctcctacggtaccaaccttgcaaatcccatctcctcct
ctgtcatcttctactcctttaatgcctctcctttatactactgaatccaacagtaacagc
aacagggccaccaatcttataaagccctcttcattttttgttcctccgccttcctcttct
gcaatgatgatgctacctgtctcttcatccgtgcctactgctcctccacttgctccagca
gcgaccctacaacgcccatatggttctccattgttacaaccatttccaccaccaactcca
cctccaccatctcttactcctgcgtctgttccaactccaaactatggaccagctattagc
cgagataaagtccaagaagcactacttgtgcttgttcaggataatcaatttattgacatg
gtgtatcgagctcttctgaatgcacacaactcctga
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