Juglans regia (English walnut): 108999098
Help
Entry
108999098 CDS
T05245
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108999098
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108999098
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-GeneID:
108999098
NCBI-ProteinID:
XP_018831441
UniProt:
A0A2I4FIG9
LinkDB
All DBs
Position
2:4895892..4898661
Genome browser
AA seq
438 aa
AA seq
DB search
MEAMKLRLLFLLAFVAIFSTTLKAHIADFDEVWQKRYEESRKASLDAYQPNPQNVTDHFN
VEVHKALNGADGTRRNLGGKSWQGPCKATNPIDRCWRCQKNWAKRRKKLTKCVLGFGRGT
TGGKHGNIYVVTDPSDGDLVNPKPGTLRHAVIQPKPLWIIFAHDMIIRLSEELIMTSDKT
LDGRGAKVHIAFGAQITIQFIRNVIIHGLRIHDIKVGSGGMVRDSVDHYGYRTRSDGDGI
SIFGSSNIWIDHVSMSNCDDGLIDAISGSTAITISNCHFTHHNEVMLFGASDGFSGDEVM
QITLAFNHFGQGLVQRMPRARWGFVHVVNNDYTHWLMYAIGGSQHPTILSQGNRFIAPPK
AFCKEVTKRDYAPESVWKTWDWRSEGDLMMNGAFFVQSGRPIKHMRKKDAVIKAKPGSFV
RRLTRFAGALNCFKHKPC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaagctatgaagcttagattgctatttttattggcttttgttgcgatattttcaaca
acgctgaaggcacacattgcggattttgatgaggtgtggcagaagcgatacgaagaatcc
aggaaggcttccctcgacgcctaccagccaaatccccagaatgttaccgatcatttcaac
gtggaggtccacaaggccttgaacggtgcagatggcacgaggagaaatttaggcggcaaa
agctggcaggggccatgcaaggctacaaacccaattgatcggtgctggagatgccagaaa
aactgggctaaacgtcgcaagaagctaacgaaatgtgtcctaggtttcggtcgtgggaca
acaggaggcaagcatgggaatatctatgtggtcacagatccatccgacggtgaccttgtt
aaccctaaaccaggaaccctacgtcatgccgtcattcagcccaagccgctttggatcatc
tttgcacacgacatgattattagactcagcgaagagctcataatgacgagtgacaagacc
ctcgatggacgtggggctaaggttcacattgcctttggtgctcaaattaccattcagttt
ataagaaatgtgatcatccatggcctccgcatccacgatataaaggttggctctggtggg
atggttagagattcagtcgatcactatggctatcgcactcgcagtgatggtgatgggatc
tcaatttttggatcctccaatatttggatcgatcatgtttccatgtcgaactgtgacgat
ggattgattgatgccatctcaggatccactgccattaccatctccaactgccacttcacc
catcataacgaggtgatgttgtttggtgcaagcgatggattcagtggagatgaagtgatg
cagataactcttgctttcaatcacttcggacagggattggtacaaaggatgccaagggca
agatgggggtttgtccacgttgtcaacaatgactacacccattggctcatgtatgccatt
ggtggcagccaacatccgaccattcttagccagggtaaccggtttatagctcctccaaag
gcattttgcaaggaggtgacgaagagggattatgcacctgagagcgtgtggaagacatgg
gactggagatcagagggtgatttgatgatgaatggagccttctttgttcaatctggaaga
ccaattaaacacatgcgcaagaaggatgcagtgatcaaagcaaaaccaggttcgtttgtg
agaaggctcacccgctttgcaggcgctctcaactgcttcaagcataagccatgttaa
DBGET
integrated database retrieval system
