Juglans regia (English walnut): 108999534
Help
Entry
108999534 CDS
T05245
Name
(RefSeq) THO complex subunit 4B-like
KO
K12881
THO complex subunit 4
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
jre03015
mRNA surveillance pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108999534
09122 Translation
03013 Nucleocytoplasmic transport
108999534
03015 mRNA surveillance pathway
108999534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108999534
03041 Spliceosome [BR:
jre03041
]
108999534
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108999534
TREX complex
108999534
Spliceosome [BR:
jre03041
]
Complex C
Other components
EJC/TREX
108999534
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108999534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
108999534
NCBI-ProteinID:
XP_018831985
UniProt:
A0A2I4FK07
A0A833WK76
LinkDB
All DBs
Position
12:29958239..29960746
Genome browser
AA seq
239 aa
AA seq
DB search
MSNKLDMSLDDVIMNSRRSGGYNGNSRGRGRASGLGPDRRFANRTVPRMAPYYTPQPMQV
VDSIFQHQMVLGGGSNTEEGTKLYISNLDYDVSGEDLQVLFSEVGDLKRYFIHYDRSGRS
KGTAEVVFLRQLDAVAAIKRYNNVELDGKPMKIELVGVSLVTPAIVPPSTSSILGNPIGT
FRSGQGRAGHGGWVRGGGSGFGHGPARGSTQGKGHVEKLTAEDLDADLEKYRLETLQTN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaactggacatgtctctcgacgacgtgatcatgaacagtcggagatccgga
ggctacaatggtaattccaggggccgaggccgcgcctccggtctcggtccagaccgtagg
ttcgcgaaccgcaccgtgcctagaatggcgccgtactacactccgcagccaatgcaagtg
gtggattccatttttcagcatcaaatggtgttgggtggaggctcaaacacagaggaaggc
accaaactatatatatcaaacttagattacgatgtttctggcgaagatcttcaggtcctt
ttctctgaggttggtgacttgaaaagatatttcattcattatgataggagtggaaggtca
aagggaacagctgaagttgtctttttacgacagttggatgctgtggcagccattaagaga
tacaacaatgttgaacttgatgggaagccaatgaaaattgagctggtaggggtgagtttg
gttacgcctgccattgtacctcctagtacaagtagcatcttaggaaatccaattggcacc
ttcagaagtggacaagggcgggctggacatgggggctgggttcgaggtggtggtagtggc
tttggccatggacctgcaaggggaagtacacaggggaaaggtcatgttgagaagttaact
gcggaagatcttgatgctgacttggagaaataccgccttgaaactctgcaaacgaactga
DBGET
integrated database retrieval system