Juglans regia (English walnut): 109000535
Help
Entry
109000535 CDS
T05245
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
109000535
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109000535
microRNA pathway
RISC loading complex
109000535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
PAZ
Dicer_dimer
dsrm
Motif
Other DBs
NCBI-GeneID:
109000535
NCBI-ProteinID:
XP_035548684
UniProt:
A0A6P9EMA0
LinkDB
All DBs
Position
8:complement(17992682..18040513)
Genome browser
AA seq
973 aa
AA seq
DB search
MAVIYTWFGDPLREIVVCQAAPELGLLPLPVVSKYQVTAQTADKDRGVSSHAWVRPAATI
LLWQGVRSWSSLPMVPLAARRCVLGLGRLLSPEVITAQWWDSGCPSSVPKPFWMGLRLWA
QYTVSMSRLLAYSGFLPEGPGVSTADLCRRFLAPEANRIFHVFSCHPARAFGIRRLALPK
SFPLQIFVQKGNMNSEIIKEIACLEACNQHREIGALRDNLVEEANAQERGNEPYIDEQPS
YFPPELVGHIPKNSNYHYYLMELEQKFVYDIPVHDIVLVLSNKLEAELGSLHFDLDVGRG
SLTVNFKYVGVINLSTDQVLLCRRFQKKLLRVLIYQDLNMDGDILGAETDYLLLPATGKH
QRSVIIDWHCVKSVLFSCEKNGEFHLNCALPKDCARIVQTKDGPVCTCLLQNSLVYTPHT
HQVYCTMGIMGLNANSRMQHRQGKINTYKEYYEERHGIKLCFEHESLVRARPVFRVKKYL
QRCRNQKKKESSMMSVELPPELCSIVMSPISINTFYSFSFVPSIMHRLESLLIAANLKKM
HLDHCTQNDVIPISKVLEAITTKKCQETFDFESLETLGDSFLKYAVSQQLFKTYQDQPEG
VLTSKREKIISNAALCEFGCYRKLPGFIRDESFDPNKWIIPGDRSGSALSEELLFNTRKI
YIRETRKMESETVADVVEALIGAFLSIGGETSALLFMDWLGIKVDFHITPYERPFLIHAE
KRLNVRHLESLLNYSFHDPSLLVEALTHGSMLSEIPRDYERLEFLGDSVLDYLMTKHFYY
EYHGLSPGQLTDMRSASVNNECYARSAVKFGLHEHILRDSQELDKQIVITSNNFEKLSSD
STFGWDAETTFTKVLADIIESLAGAILVDSGYNKERVFGSIRPLLEPLITPETVMSHPAK
ELNELCQKEHYIMKETNKNRNDNEGLSSITIKVYAKGLSFEHTAKAGNGETAKKLACKEV
LKSLKDFALHGKS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggctgttatttatacctggtttggggatccgctgagggagatcgtggtgtgtcaggcc
gcacctgagttaggtctgctaccactccctgttgtgtcgaagtatcaggtcacggcccag
actgctgacaaagatcgtggtgtgtcaagtcatgcttgggtcagacctgctgccaccatc
ttattatggcagggggtcaggtcatggtcgagccttcctatggttcctctggcagcacgt
cgttgcgtgctggggctcggtaggttactgagtcccgaggtgatcactgcccagtggtgg
gattctgggtgcccgagctcggtaccgaaacctttctggatgggcctacggttgtgggct
cagtacacggtttccatgtctaggctgctggcctactctgggtttttgcctgaggggcct
ggggtctccacagctgacctctgcaggaggttccttgccccggaagcaaatagaattttc
cacgtcttttcctgtcacccagcacgagccttcgggatcagaagacttgcacttcccaag
agctttcctttgcaaatctttgttcaaaaaggaaacatgaactctgagatcataaaggaa
attgcctgccttgaagcatgcaatcaacatcgtgagattggtgcattgagagataatctt
gtggaagaagctaatgctcaagaaagggggaacgaaccttatattgatgagcaacccagt
tatttcccacctgaactggtcggtcatattccaaagaattcgaattatcattactactta
atggagctggagcagaaatttgtttacgatattccagttcatgatattgtgcttgtcctg
agtaataagctagaagctgaacttggaagcttgcattttgacttggatgttggcaggggt
agtttgacagtgaactttaaatatgtaggagtgattaatctcagcacagatcaggtcctt
ttgtgtagaaggtttcagaaaaaacttttaagagttcttatttatcaagatttgaatatg
gatggagatattttgggagctgagactgattatcttttgctcccggccactggaaagcat
cagagatctgtgatcattgattggcattgcgttaagtctgtgctattttcgtgtgagaag
aatggtgaatttcacttgaattgtgctttacccaaggattgtgctcgtattgtacaaacc
aaagatggtcctgtatgcacttgcctgcttcagaattctttggtgtacacccctcacact
catcaggtgtattgcacaatggggattatgggattgaatgcaaactcacgtatgcagcac
cgtcaaggcaaaatcaatacttacaaggagtactatgaagaacggcatggcatcaagctg
tgttttgagcacgaatcattggttcgtgcaagacctgtttttcgggtgaaaaaatacctt
caaagatgcagaaatcagaaaaagaaagaatcaagtatgatgtcagttgaattgcctccg
gagctttgttctatagttatgtcaccaatatcaatcaatacattttattctttctcattt
gttccttcaatcatgcaccggcttgagtctttgcttatagctgccaacttaaaaaagatg
catttggatcattgcacacaaaatgatgtcatcccaatttccaaggtcttggaagcaatt
actacaaagaaatgccaagagacatttgactttgaatccttagaaacgcttggagattca
tttctcaaatatgctgtgagtcaacaactttttaagacctatcaagatcaacccgagggt
gtccttacttcgaagagagaaaaaataatttcaaatgcagctctttgtgagtttggatgt
taccgcaaacttccgggatttattcgagatgagtccttcgatccgaacaagtggatcatt
ccgggtgatagatcgggtagtgcattaagtgaggagttactttttaacacgagaaaaatc
tatattagggaaactaggaagatggaaagtgaaactgttgctgatgttgtggaggcacta
attggtgcatttctaagcattggcggtgaaacatcagcattattatttatggattggttg
ggtataaaggtggattttcacataacaccatatgagagacccttcctaattcacgctgag
aagcgtctcaatgtcagacatttggagtccctattgaactactcatttcatgatccttca
ttgttagtggaagcactgacccatggtagcatgcttagcgagattccaagagattatgag
cgacttgaatttcttggggactcagttttggattatctcatgaccaagcatttctactat
gaatatcatgggttatcaccaggacagttaactgacatgagatctgcttctgtaaataat
gaatgttatgcacgatctgcagttaagtttggactacacgaacacatcctccgtgactca
caagaactcgacaagcagatagttataactagtaacaattttgagaagttatcatcagac
tcaacttttggatgggatgctgagaccacattcactaaggtacttgctgatattatagag
tctctagcaggtgccattcttgttgattcaggatacaataaggagagagtctttggcagc
ataaggccccttttagagcctctgatcacacctgaaacagtaatgtctcatcctgcaaaa
gagctgaatgaactatgccaaaaagagcattacattatgaaagagacaaacaagaaccgc
aacgacaacgagggtcttagttccattacaataaaggtatatgctaaaggtctctcattc
gagcatacagctaaagctggcaacggagaaacagcaaaaaaattagcttgtaaagaagtt
ttgaagtccttgaaggatttcgctttacatggtaaaagttaa
DBGET
integrated database retrieval system
