Juglans regia (English walnut): 109000541
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Entry
109000541 CDS
T05245
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
109000541
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109000541
microRNA pathway
RISC loading complex
109000541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssb-like_OB
Ribonuclease_3
Ribonucleas_3_3
PAZ
dsrm
Motif
Other DBs
NCBI-GeneID:
109000541
NCBI-ProteinID:
XP_018833005
UniProt:
A0A2I4FMZ7
A0A833UJD7
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All DBs
Position
8:complement(18055826..18060736)
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AA seq
946 aa
AA seq
DB search
MNSEIIKEIACLEACNQHREIGALRDNPVEEANAQERGNEPYIDEQPSYFPPELVGHIPK
NSNILYHYYLMELEQKFAYDIPVHDIVLVLRDKLEPELESLHFDLDVDRGSLTVNFKYVG
VINLSTDQVLLCRRFQKTLLRVLIYHDLGSLNERMDGDILGAETDYLLIPATGKHQRPVT
IDWHCVNSVLFSCKKNGEFHLNCALPKDSARIVQTEDGPVCTCLLQNSLVYTHTDQFYCT
TGIMGLNANSRMQHSRGKFNTYKEYYEKQHGIKLCFEHESLVSGRPIFMVKNYLQRCRNQ
KEKESRMSSVELPPELCSIVMSPISINTFYSFSFVPSIMHRLESLLIAANLKMMHLDHCK
QNDVLPISKVLEAITTKKCQETFDLESLETLGDSFLKYAVSKQLFKTYEDQREGVLTLEK
EKIISNAALCEFGCHRKLPGFIRDESFDPKKLIIPDDRSGSALSEELLFNTRKIYIRETR
KMECETVADVVEALIGAFLSSGGETSALLFMEWLGIKVDFYITPYERPFLIHAEKHLNVR
HLESLLNYSFRDPSLLVEALTHGSMLREIPRDYERLEFLGHSVLDYLMTKHFYYEYPGLS
PELLTDTRSASVNNDCYARSAVKWELHKHILHASQELHKQIVETSNNFEKVSSESTFGWD
SETTLPKVLGDIIESLAGAILVDSGYNKEMVFGSIRPLLEPLITPETSMSHPVKELMELC
QKEHYNIKETNKNCNDNDGLSSITVKVLDAKGLSLIEHTATAANGKTARKLAYKEVLKSL
KESKAFSGLSASHSEISIATTSTGVQAVAKRKPVFIKVDQLTPGTQGHTLAVKVVSSKPV
KVTNSKPALSSRILSRHLHPIRIAECLVGDETGTIVFTARNDQVDIMKPGATVILRNAKI
EMFKGFMRMVVDKWGRVEVTELANFDVKEDHNLSLVEYELVDAIEE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgaactctgagatcataaaggaaattgcctgccttgaagcatgcaatcaacatcgtgag
attggtgcattgagagataatcctgtggaagaagctaatgctcaagaaagggggaacgaa
ccttatattgatgagcaacccagttatttcccacctgaactggtcggtcatattccaaag
aattcgaatatactgtatcattactacttaatggagctggagcagaaatttgcttacgat
attccagttcatgatattgtgcttgtcctgagagacaagctagaacctgaacttgaaagc
ttgcattttgacttggatgttgacaggggtagtttgacagtgaactttaaatatgtagga
gtgattaatcttagcacagatcaggtccttttgtgtagaaggtttcagaaaactctttta
agagttcttatttatcatgatttgggaagtttaaacgagcgtatggatggagatattttg
ggagctgagactgattatcttttgatcccagccactggaaagcatcagagacctgtgacc
attgattggcattgcgttaattctgtgctattttcgtgtaagaagaatggtgaatttcac
ttgaattgtgctttacccaaggattctgctcgtattgtacaaaccgaagatggtcctgta
tgcacttgcctgcttcagaattctttggtgtacactcacactgatcagttttattgcaca
actgggattatgggattgaatgcaaactcacgtatgcagcacagtcgtggcaaattcaat
acttacaaggagtactatgaaaaacagcatggaatcaagctgtgttttgagcacgaatca
ttggttagtgggagacccatttttatggtgaaaaattaccttcaaagatgcagaaatcag
aaagagaaagaatcaagaatgtcgtcggttgaattgcctccggagctttgttctatagtt
atgtcaccaatatcaatcaatacattttattctttctcatttgttccttcaatcatgcac
cggcttgagtctttgcttatagctgccaacttaaaaatgatgcatttggatcattgcaag
cagaatgatgttcttccaatctccaaggtcttggaagcaattaccacaaagaaatgccaa
gagacatttgatttggaatccttagaaacgcttggagattcatttctcaaatatgctgtg
agtaaacaactttttaagacctatgaagatcaacgtgagggtgtccttactttggagaaa
gaaaaaataatttcaaatgcagctctttgcgagtttggatgtcaccgcaaacttccggga
tttattcgagatgagtccttcgatccgaaaaagttgatcattccggatgatagatcgggt
agtgcattaagtgaggagttactctttaatacgagaaaaatctatattagggaaactagg
aagatggaatgtgaaactgttgctgatgttgtggaggcactaattggtgcatttctaagc
agtggcggtgaaacatcagcattattattcatggaatggttgggtataaaggtggatttt
tacataacaccatatgagagacccttcctaattcacgctgagaagcatctcaatgtcaga
catttggagtccttattgaactattcatttcgtgatccttcattgttagtggaagcattg
acccatggtagcatgcttcgcgagattccaagagattatgagcgacttgaatttcttggg
cactcagttttggattatctaatgaccaagcatttctattatgaatatcctgggttgtca
ccagaactgttaactgacacgagatctgcttctgtgaataatgattgttatgcacgatct
gcagtcaagtgggaactgcacaaacacatcctccatgcctcacaagaactccacaagcag
atagttgaaactagtaacaattttgagaaggtatcatcagaatcaacttttggatgggac
tccgagacaactctccccaaggtacttggtgacattatagagtctctagcaggtgccatt
cttgttgattcaggatacaataaggagatggtctttggtagtataaggcctcttttagag
cctctgatcacacctgaaacgtcaatgtctcatcctgtaaaggagttgatggaactatgc
caaaaagagcattacaatattaaagagacaaacaagaactgcaatgacaacgatggtctt
agttccattacagtaaaggtactagatgctaaaggtctctcattaatcgagcatacagct
acagctgccaacggaaaaacagcaagaaaattagcttataaagaagttttgaagtccttg
aaggaatccaaggccttttctggcctttcggcttctcattctgagatttctatagcgacg
acgtcaacaggggttcaagcggttgcgaagaggaagcctgtgttcatcaaggtggaccag
ctgacacccggcacgcaaggccacacccttgctgtcaaggttgtcagctccaagcccgtc
aaggtcaccaacagcaagcctgcgctatcgtctaggattttatctcggcacctacacccc
atacgaatcgccgagtgccttgtcggcgacgagactgggaccatcgtcttcactgctcgc
aatgatcaagttgatatcatgaagcccggtgccactgtgatcctgcggaatgcaaagatt
gagatgtttaaagggtttatgaggatggtagttgataaatgggggcgtgttgaggtcact
gaacttgcaaattttgatgttaaagaggatcacaatctctctcttgtggagtatgagcta
gttgatgccattgaagaatga
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