KEGG   Juglans regia (English walnut): 109000678
Entry
109000678         CDS       T05245                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109000678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109000678
Spliceosome [BR:jre03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109000678
 Complex B
    109000678
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 109000678
NCBI-ProteinID: XP_018833184
UniProt: A0A833TVG2 A0A2I4FNE4
LinkDB
Position
14:complement(22603778..22614805)
AA seq 326 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTVLLSNMYQRPDMITP
GVDAQGHPIDPRTIQRHFEEFYEDLFEELGKYGEIESLNVCDNLADHMVGNVYVQFREEE
HAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL
RRQLFGRYRRRHSHSRSRSPYRHRSYEERSHGSHGSGRKYDERDRYYESQSRRHRSEGPG
HKRERSRSRSPGGRRNHSPIREGSEERRAKIEQWNREREQHQQQDNSSKIDNYGNNDGSY
NGHVQNGDQYDDCQQQRSPLQEGYNY
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcggagcatttggcttcgatattcgggacggagaaggaccgcgtgaactgccccttc
tacttcaagatcggagcttgtaggcatggagaccgctgctcccgcctccataccaagccc
agcatcagccccactgttctcctctccaatatgtaccagcgccccgacatgatcacccct
ggtgttgatgcccagggccaccccattgacccccgcaccatacaaaggcatttcgaggaa
ttctatgaagatctgtttgaggaactagggaagtacggagaaattgagagcctcaatgtt
tgcgataaccttgctgaccacatggttggtaatgtctacgttcagttcagagaggaggaa
catgctgccaatgctctccggaatcttaccggaagattttatgctggccgtcccatcatt
gttgacttttctccggtgacagacttccgtgaagccacctgtaggcagtatgaggagaac
acatgcaaccgtggtggatactgtaattttatgcacttgaaaaggattagcagggagttg
aggcgtcaattgtttgggaggtaccgacgaaggcacagtcacagtcgcagtcgaagcccc
tacaggcatcgtagctatgaagagcgctctcacggaagccatggttcaggaagaaagtat
gatgaaagggaccgttattatgaaagtcagagcaggaggcataggagtgaaggccctggc
cataagcgagaacgaagcagaagtaggagccctgggggaaggaggaaccacagtccgatt
agggaaggcagtgaggagagacgtgccaaaattgagcagtggaaccgggaaagggaacaa
catcaacagcaagacaattctagtaagattgacaattatggaaataatgatggaagttat
aatggacatgtgcagaatggagatcagtatgatgactgccagcagcagcggagtccacta
caagaaggatataattactga

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